Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq38040 95.1 1e-14 seq22409 95.1 1e-14 seq98588 87.8 2e-12 >seq38040 Length=2861 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || ||||| |||||||| | ||| || || | || |||| |||||||| ||||| Sbjct 1816 CTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCTTCCAATTGCTTACCAGCAAA 1875 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||| | ||||| ||||| | || | || ||||| ||| || || ||||| | | Sbjct 1876 TATGAGACGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGTATTTTAGCCTTCACATT 1935 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| | ||| || |||| || || || || || ||||| |||||||| Sbjct 1936 CTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCAC 1995 Query 35725 AAATATCTGCAT 35736 |||||| ||||| Sbjct 1996 AAATATTTGCAT 2007 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || |||||||||||||| |||| | ||| || |||| |||| ||||| || ||||| Sbjct 2501 TCTTTTTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAA 2560 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGT 35664 ||||| || || || || | ||||| || || |||| | ||| ||| | ||| | | | Sbjct 2561 ATCAAACGTTGTTGATCTGGAGGAATGCCTTCTTTGT-CTTGAATTTTAGCCTTAACATT 2619 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| | ||| || || | ||| || ||||| || || | ||||| || Sbjct 2620 TTCAATTGTGTCAGAAGCTTCAACTTCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAAC 2679 Query 35725 AAATATCTGCAT 35736 ||| || ||||| Sbjct 2680 AAAAATTTGCAT 2691 >seq22409 Length=1756 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||||||||||||||| || | ||| || || | || || ||||| ||||| ||||| Sbjct 1473 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGCTGTTTACCAGCAAAG 1532 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGT 35664 ||||| || |||||||| | |||| | ||||| | | ||| ||| || || | | | Sbjct 1533 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTAT-CTTGAATTTTCGCTTTTACATT 1591 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | || || | ||||||||| | || || ||||||||||| | || || || Sbjct 1592 TTCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGAC 1651 Query 35725 AAATATCTGCATTCTG 35740 || || |||||| || Sbjct 1652 GAAAATTTGCATTGTG 1667 >seq98588 Length=355 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | ||| ||||| || | ||| || |||||||||||||| |||| Sbjct 342 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGG 283 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || || | || |||| |||||||| ||||| || | |||||||| || | | Sbjct 282 AAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTG 223 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 | | || ||| ||||| ||| ||| || || | || | | || || | |||| Sbjct 222 GGATGCCCTCTTTGTCTTGGAT-TTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCC 164 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| || || || || || || | ||||| ||||| |||||||| Sbjct 163 ACTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449257306681040