Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_027398.1 Length=38742 Score E Sequences producing significant alignments: (Bits) Value seq270211 122 2e-23 seq262377 113 1e-20 >seq270211 Length=286 Score = 122 bits (134), Expect = 2e-23 Identities = 142/188 (76%), Gaps = 4/188 (2%) Strand=Plus/Plus Query 19372 TGGCGAACACATGATTTCAGAAGAACGCTTGTTACACGTCTGTCCGAGATGAATGTCGA- 19430 ||||| || || ||||| || || | || |||||| |||||| || |||| || | Sbjct 53 TGGCGCACTCACGATTTTAGGCGATCACTAGTTACAAACCTGTCC-AG-TGAAGGTATAC 110 Query 19431 -GCCTCATGTTACTGAGCGAATGCTCGGTCATGAACTTGGCGGGATAATGTCCGTATACA 19489 |||||| |||||||| |||||| || |||||| | || || | ||| | || || | Sbjct 111 CGCCTCACGTTACTGAAAAAATGCTGGGACATGAATTAGGTGGAGTTATGGCTGTTTATA 170 Query 19490 ATAAACACGACTGGATAGAGGCTCAGCGCAAAGCGTATGAGCTTCACGCTGATAAATTGT 19549 |||| || ||||||||| ||| |||||| |||| |||||||| ||||||||||| | | Sbjct 171 ATAAGCATGACTGGATAAAGGAACAGCGCGAAGCATATGAGCTATACGCTGATAAAATAT 230 Query 19550 TCTGGCAC 19557 |||||||| Sbjct 231 TCTGGCAC 238 >seq262377 Length=537 Score = 113 bits (124), Expect = 1e-20 Identities = 356/539 (66%), Gaps = 12/539 (2%) Strand=Plus/Plus Query 7648 GCCCAGCCATCGTTGATGGTGCAAAAAGGAATCGCCGGAACCTACTGCAAAACGCCGTT- 7706 || ||||| || ||||||| || || || ||||| ||||| | | || || | || | Sbjct 3 GCTCAGCCGTCACTGATGGTCCAGAAGGGGATCGCTGGAACGTTC-GCCAAGTGTCGCTA 61 Query 7707 TGCTGATTCGTATGCGTTCATCAACAATCCGGC-AACAGGTGCGCCGTCTGTTTACATCA 7765 ||| || || | || || | | ||| ||||| ||| ||| |||| |||||||| | | Sbjct 62 TGCAGACTCACACGCCTTTGTTAGCAACCCGGCCAACGGGT-CGCCTTCTGTTTATGTGA 120 Query 7766 TCGGCTCCGG-TCAGGTATCACCAATCGCCAGCGCGAGCATTGAGAAAATACTACGCTCC 7824 | || || || | || ||| |||| || | || | || || | || | Sbjct 121 TAAGCCAAGGCTCTGCTA-CACAAATCTCCTCGGTCAGTGTCGATAAGGTTCTGAGAAGT 179 Query 7825 TACACTGCTGATGAACTGGCTGATGGCGTGATGGAGTCTCTGCGATTTGATGCTCATGAG 7884 |||| || ||| ||||| | | |||||||| | ||||| |||| ||| ||| Sbjct 180 TACAGCGCCACTGATTTGGCTCAGGTGCACATGGAGTCCTTACGATTCGATGGTCACGAG 239 Query 7885 TTGCTGATTATCCACCTTCCGCGCCACGTCCTCGTGTACGACGCATCTTCAAGCGCCAAT 7944 | | || |||||||| ||| | || || || ||||| || |||| || Sbjct 240 CTAATCATCATCCACCTACCGAATGATGTACTTTGCTATGACGCCTCAGCAAGTCAGAAC 299 Query 7945 GGTCCTCAATGGTGTGTGTTGAAAACAGGCCTGTATGACGATGTGTACCGCGCTATCGAC 8004 ||||| ||||||| | ||||||| || || ||||| | | | || ||||||||| Sbjct 300 GGTCCGCAATGGTCAATCCTGAAAACTGGACTCTATGATACTCCGCATCGTGCTATCGAC 359 Query 8005 TTCATTTACGAAGGCAATCAGATAACGTGCGGCGATAAGCTGGAATCTGTTACCGGGAAA 8064 ||||| || || || || ||||| || ||||| || ||| | ||||||| |||||| | Sbjct 360 TTCATGTATGAGGGTAACCAGATTACCTGCGGAGACAAGACGCAATCTGTGACCGGGTAT 419 Query 8065 CTGCA--ATTCGACATCAGCAGCCAGTACGACAAGCAACAGGAACACCTGCTGTTTACTC 8122 || | || | ||| || ||||||||| | || |||||||| || | || | Sbjct 420 CTTAATTATGCTCACTCATCA--CAGTACGACGCAGAGCAAGAACACCTTCTCTACACGC 477 Query 8123 CGTTGTTCAAAGCGGATAAC-GCCAGAGTTTTCGACCTTGAAGTTGAATCGTCAACTGG 8180 | | ||||| || |||||| || || | ||||| | ||| | ||| | ||||| || Sbjct 478 CACTTTTCAAGGCTGATAACAACCTGA-TATTCGATTTCGAATTAGAAGCATCAACAGG 535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123451817116224