Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq56742 96.9 3e-15 seq55316 89.7 4e-13 seq75436 84.2 2e-11 >seq56742 Length=3759 Score = 96.9 bits (106), Expect = 3e-15 Identities = 110/145 (76%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 115031 AATGGTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTC 115090 ||| |||||||| ||||| | ||||| ||||||||||| | |||||| ||| || || Sbjct 3250 AATTGTCATACGAGAAGGGATGGCATGGGGATTAATAATGATATCTGGCGTTAAGCCCTC 3191 Query 115091 GGCTGTGAACGGCATGTCGTGCTGATCG-TACATCATTCCACAAGTTCCTTTTTGAGCGG 115149 | ||| |||||||| || | || ||| ||| |||||||| |||||||||||| || Sbjct 3190 GCATGTAAACGGCATATCTTCTTG-TCGATACTGGATTCCACATGTTCCTTTTTGACCGT 3132 Query 115150 TAAACGATGCAAATTTATCACCAAT 115174 | || ||||| ||||| ||||| Sbjct 3131 GACGAGAAGCAAACTTATCCCCAAT 3107 >seq55316 Length=1040 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 43796 GACTTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTAT--ATCTTTGGTTT 43853 ||||| ||| ||||| |||||||| || ||||||||||| | | | || | Sbjct 585 GACTTGGCAGATTGGGAGACATTAAAAGATTGCGAGAAACATTTTATCAAACAT--GTCT 642 Query 43854 TGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGC 43913 | || || ||||| || || || || || ||||| || || || || || | | Sbjct 643 TAGCATTCTTTGCGGCTTCTGATGGTATTGTTAATGAGAACTTAGTGGAGCGTTTCTCAC 702 Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973 |||| |||||| | | ||||| | || || ||||||||||||||||| || |||||| Sbjct 703 AAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGGTTTCAAATTGCAATGGAAAATG 762 Query 43974 TTCATTCGGAAATGTAC 43990 ||||||| || |||||| Sbjct 763 TTCATTCAGAGATGTAC 779 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 43709 TTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGG 43768 || ||||| ||||||| ||||||||||| ||||| |||||||| | || || |||||| Sbjct 381 TTCCCAATCCAATATCCAGACATATGGCAGATGTATAAAAAAGCTGAAGCATCGTTTTGG 440 Query 43769 ACAGCAGAAGAAGTTGATTTGACTAA 43794 || ||||||||||| || || |||| Sbjct 441 ACTGCAGAAGAAGTAGACTTATCTAA 466 >seq75436 Length=4605 Score = 84.2 bits (92), Expect = 2e-11 Identities = 240/361 (66%), Gaps = 10/361 (3%) Strand=Plus/Plus Query 19243 ATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGTT 19302 || |||||||||| || |||||| | | || ||| | ||||| |||||| | ||| Sbjct 888 ATAGGAGGATTGAAAAAGGAGTTTGGTCAGATGTTTAGAAGAGCGTTTGTGCAAAGGGTT 947 Query 19303 TTTTCTGCA--GATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTT 19360 || | || | || |||||| |||| || | |||||| || | || | | Sbjct 948 TT--CGACAAGGGAGTTATTAAAAAATTAGGTATTCCACATGTAAAAGGTATCATGTTGT 1005 Query 19361 ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTT-ACA 19419 |||| || || || ||||||||| | ||||| | | | | |||| | ||| ||| Sbjct 1006 ATGGACCGCCAGGAACTGGAAAAACGCTGATTGCTAAAAGATTAGGTAATCTTCTTGACA 1065 Query 19420 AAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCG 19479 | ||||| || ||||||||||| |||||||| ||||| || ||| | || ||| Sbjct 1066 CTAGG-CCTCCAAAGATTGTAAATGGACCTGAAATTTTAAACAAGTATATTGGACAAAGT 1124 Query 19480 GAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGT--TTAGGGC 19537 ||||||||| | | |||||| || || || |||||| || || | || Sbjct 1125 GAAGAAAATATTAGGAACTTGTTTAAAGATGCGGAGGAAGAA-TGGAAGGTAAAAAAGGA 1183 Query 19538 GCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAG 19597 | |||| ||| || |||||||| | |||||| | || ||||| || || |||||| Sbjct 1184 G-GAAAGCGCTTCACATATTATAATTTTTGATGAAGTAGATGCAATTTGCAAAAAAAGAG 1242 Query 19598 G 19598 | Sbjct 1243 G 1243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396135342891190