Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq56742 96.9 3e-15
seq55316 89.7 4e-13
seq75436 84.2 2e-11
>seq56742
Length=3759
Score = 96.9 bits (106), Expect = 3e-15
Identities = 110/145 (76%), Gaps = 2/145 (1%)
Strand=Plus/Minus
Query 115031 AATGGTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTC 115090
||| |||||||| ||||| | ||||| ||||||||||| | |||||| ||| || ||
Sbjct 3250 AATTGTCATACGAGAAGGGATGGCATGGGGATTAATAATGATATCTGGCGTTAAGCCCTC 3191
Query 115091 GGCTGTGAACGGCATGTCGTGCTGATCG-TACATCATTCCACAAGTTCCTTTTTGAGCGG 115149
| ||| |||||||| || | || ||| ||| |||||||| |||||||||||| ||
Sbjct 3190 GCATGTAAACGGCATATCTTCTTG-TCGATACTGGATTCCACATGTTCCTTTTTGACCGT 3132
Query 115150 TAAACGATGCAAATTTATCACCAAT 115174
| || ||||| ||||| |||||
Sbjct 3131 GACGAGAAGCAAACTTATCCCCAAT 3107
>seq55316
Length=1040
Score = 89.7 bits (98), Expect = 4e-13
Identities = 139/197 (71%), Gaps = 4/197 (2%)
Strand=Plus/Plus
Query 43796 GACTTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTAT--ATCTTTGGTTT 43853
||||| ||| ||||| |||||||| || ||||||||||| | | | || |
Sbjct 585 GACTTGGCAGATTGGGAGACATTAAAAGATTGCGAGAAACATTTTATCAAACAT--GTCT 642
Query 43854 TGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGC 43913
| || || ||||| || || || || || ||||| || || || || || | |
Sbjct 643 TAGCATTCTTTGCGGCTTCTGATGGTATTGTTAATGAGAACTTAGTGGAGCGTTTCTCAC 702
Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973
|||| |||||| | | ||||| | || || ||||||||||||||||| || ||||||
Sbjct 703 AAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGGTTTCAAATTGCAATGGAAAATG 762
Query 43974 TTCATTCGGAAATGTAC 43990
||||||| || ||||||
Sbjct 763 TTCATTCAGAGATGTAC 779
Score = 84.2 bits (92), Expect = 2e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 43709 TTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGG 43768
|| ||||| ||||||| ||||||||||| ||||| |||||||| | || || ||||||
Sbjct 381 TTCCCAATCCAATATCCAGACATATGGCAGATGTATAAAAAAGCTGAAGCATCGTTTTGG 440
Query 43769 ACAGCAGAAGAAGTTGATTTGACTAA 43794
|| ||||||||||| || || ||||
Sbjct 441 ACTGCAGAAGAAGTAGACTTATCTAA 466
>seq75436
Length=4605
Score = 84.2 bits (92), Expect = 2e-11
Identities = 240/361 (66%), Gaps = 10/361 (3%)
Strand=Plus/Plus
Query 19243 ATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGTT 19302
|| |||||||||| || |||||| | | || ||| | ||||| |||||| | |||
Sbjct 888 ATAGGAGGATTGAAAAAGGAGTTTGGTCAGATGTTTAGAAGAGCGTTTGTGCAAAGGGTT 947
Query 19303 TTTTCTGCA--GATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTT 19360
|| | || | || |||||| |||| || | |||||| || | || | |
Sbjct 948 TT--CGACAAGGGAGTTATTAAAAAATTAGGTATTCCACATGTAAAAGGTATCATGTTGT 1005
Query 19361 ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTT-ACA 19419
|||| || || || ||||||||| | ||||| | | | | |||| | ||| |||
Sbjct 1006 ATGGACCGCCAGGAACTGGAAAAACGCTGATTGCTAAAAGATTAGGTAATCTTCTTGACA 1065
Query 19420 AAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCG 19479
| ||||| || ||||||||||| |||||||| ||||| || ||| | || |||
Sbjct 1066 CTAGG-CCTCCAAAGATTGTAAATGGACCTGAAATTTTAAACAAGTATATTGGACAAAGT 1124
Query 19480 GAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGT--TTAGGGC 19537
||||||||| | | |||||| || || || |||||| || || | ||
Sbjct 1125 GAAGAAAATATTAGGAACTTGTTTAAAGATGCGGAGGAAGAA-TGGAAGGTAAAAAAGGA 1183
Query 19538 GCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAG 19597
| |||| ||| || |||||||| | |||||| | || ||||| || || ||||||
Sbjct 1184 G-GAAAGCGCTTCACATATTATAATTTTTGATGAAGTAGATGCAATTTGCAAAAAAAGAG 1242
Query 19598 G 19598
|
Sbjct 1243 G 1243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396135342891190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |