Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq157294 127 3e-24
>seq157294
Length=2047
Score = 127 bits (140), Expect = 3e-24
Identities = 617/959 (64%), Gaps = 32/959 (3%)
Strand=Plus/Plus
Query 110471 TGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCC 110530
|| |||||||| | || | |||||||| |||||| |||| ||||| ||||||| |
Sbjct 314 TGATCAATGAAAAGTTGACGGTCTGCCGCCAAATCAATTACATTTTTCATTTTAATTTTC 373
Query 110531 CAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAA 110590
||| |||| || || || || || |||| ||| |||| | ||||| || || |||
Sbjct 374 CAAGCTGTTTTGTAAAGTTTTTTAATGTCATTTGGTATATTTTTAATATTTTGAATTGAA 433
Query 110591 CCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGA-GACCAATCTTCTTGAG 110649
|| | | | || | || ||||| || | ||||| | | ||| | || |
Sbjct 434 CCTTCATATTCAATGATTAAATTTTTCATTTCATGTGACCACAAGTTTAATTTAATTAAA 493
Query 110650 GTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTA 110709
|| || | | | | |||||||| ||| ||||| || | ||||| ||| |||
Sbjct 494 -TCTTTCAACAAATATTCATTGACAATTTTAAATTCACCAGCATGTGTTCTCCTCGTGTA 552
Query 110710 GATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGC 110769
||||| | || | |||||||| |||||||||||| || ||||||| ||| |||
Sbjct 553 AATGTTGGAAGTAAAAGGTTCAAAACATTCATTATTATTAAATATTTGTGAGGTACTGGC 612
Query 110770 TGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCG--TTCC 110827
|| ||||| || || || || | ||| || | || || | | || || |||
Sbjct 613 GGTAGGCATAGGAGCAATTAATAAACTATTCCTAACGCCGTGATTTTTTATTTTAATTC- 671
Query 110828 TTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCC-CACATGTCAAACTGAAG 110886
| ||| ||||| | | || || | || |||| |||| ||||| ||||
Sbjct 672 -TAAGATTTTCCCATTT-TCCATGT-CTGGAATTTTTTTTCCGCACAATTCAAAATGAAA 728
Query 110887 CACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAA 110946
| ||||| | || | |||| ||| | | ||| || | || ||| |||||
Sbjct 729 AATTCCTTGCTAATAGGCA-AACCTTCATATGATTCGTATGGTCCAAATTCTTTCGCCAA 787
Query 110947 TTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC 111006
|||| ||| | |||| || | |||||| |||||||| || | ||| | ||
Sbjct 788 TTCAACGCTTTCTTCCAAGGCAGAAAAATACATCGTTTCAAATATTTTTGAATTTAAGTC 847
Query 111007 CTTGGCTTCAT--CTGAATCAAATGCGTAGCGGCACAAAATAAA-TACATCCGCGAGACC 111063
| ||||| | ||| ||||| || || | || || ||| | |||| || || ||
Sbjct 848 TCTTGCTTCTTGACTG--TCAAACGCATATCT-CATAAGGCAAAATGCATCTGCTAGTCC 904
Query 111064 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTC-TCAACGG 111122
|| | ||| | || ||||||||||||| ||||||| ||| || || ||||| |
Sbjct 905 CTGTATACCAATTCCTATAGGTCTGTGTCTCATATTACTTCTTC-TACATTCTTCAACAG 963
Query 111123 GATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCAT 111182
||||||| || | || || || ||| |||||| | |||| | ||| | | | | |
Sbjct 964 GATAAAATGTTGTATCTATACATCTGTTAAGATTTCTTGTAATTA-CTT--TAACTACTT 1020
Query 111183 G---AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGA 111239
| ||||||||| | ||||| | || ||| ||||| | ||| || | |
Sbjct 1021 GCGATAGTTTTTCAAAGTCAAA------TTTTTCATCAATGACA-AATTTTGACAAACAA 1073
Query 111240 TTGAT-GCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 111298
|| | |||||||| ||||| || | |||| || || | || || | |||||| | |
Sbjct 1074 ATGCTCGCCAAATTACAAACTGCTATTTCATTTTTGTCAGAATATTCGATAATTTCCGCA 1133
Query 111299 CATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCA 111358
|| | || ||| || || || || ||||| | ||| ||||| | |||| || |
Sbjct 1134 CAAAGATTTGAAGATTTTATTGTACCTAAATTTTGTTGATTACTTAGCCTGTTACAAGTG 1193
Query 111359 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417
|| || || ||||| || || || ||||| || |||| || | ||| || |||||
Sbjct 1194 TCTTTATAAAGCATATAAGGTGTACCCGTTTCTAATTGTGCTTCTATAATGGCTTTCCA 1252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 625891682644800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |