Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq157294 127 3e-24 >seq157294 Length=2047 Score = 127 bits (140), Expect = 3e-24 Identities = 617/959 (64%), Gaps = 32/959 (3%) Strand=Plus/Plus Query 110471 TGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCC 110530 || |||||||| | || | |||||||| |||||| |||| ||||| ||||||| | Sbjct 314 TGATCAATGAAAAGTTGACGGTCTGCCGCCAAATCAATTACATTTTTCATTTTAATTTTC 373 Query 110531 CAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAA 110590 ||| |||| || || || || || |||| ||| |||| | ||||| || || ||| Sbjct 374 CAAGCTGTTTTGTAAAGTTTTTTAATGTCATTTGGTATATTTTTAATATTTTGAATTGAA 433 Query 110591 CCCCCCGCCTTCACCATGAGATCCTTCATATCCTTGGACCAGA-GACCAATCTTCTTGAG 110649 || | | | || | || ||||| || | ||||| | | ||| | || | Sbjct 434 CCTTCATATTCAATGATTAAATTTTTCATTTCATGTGACCACAAGTTTAATTTAATTAAA 493 Query 110650 GTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTA 110709 || || | | | | |||||||| ||| ||||| || | ||||| ||| ||| Sbjct 494 -TCTTTCAACAAATATTCATTGACAATTTTAAATTCACCAGCATGTGTTCTCCTCGTGTA 552 Query 110710 GATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGC 110769 ||||| | || | |||||||| |||||||||||| || ||||||| ||| ||| Sbjct 553 AATGTTGGAAGTAAAAGGTTCAAAACATTCATTATTATTAAATATTTGTGAGGTACTGGC 612 Query 110770 TGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCG--TTCC 110827 || ||||| || || || || | ||| || | || || | | || || ||| Sbjct 613 GGTAGGCATAGGAGCAATTAATAAACTATTCCTAACGCCGTGATTTTTTATTTTAATTC- 671 Query 110828 TTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCC-CACATGTCAAACTGAAG 110886 | ||| ||||| | | || || | || |||| |||| ||||| |||| Sbjct 672 -TAAGATTTTCCCATTT-TCCATGT-CTGGAATTTTTTTTCCGCACAATTCAAAATGAAA 728 Query 110887 CACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAA 110946 | ||||| | || | |||| ||| | | ||| || | || ||| ||||| Sbjct 729 AATTCCTTGCTAATAGGCA-AACCTTCATATGATTCGTATGGTCCAAATTCTTTCGCCAA 787 Query 110947 TTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC 111006 |||| ||| | |||| || | |||||| |||||||| || | ||| | || Sbjct 788 TTCAACGCTTTCTTCCAAGGCAGAAAAATACATCGTTTCAAATATTTTTGAATTTAAGTC 847 Query 111007 CTTGGCTTCAT--CTGAATCAAATGCGTAGCGGCACAAAATAAA-TACATCCGCGAGACC 111063 | ||||| | ||| ||||| || || | || || ||| | |||| || || || Sbjct 848 TCTTGCTTCTTGACTG--TCAAACGCATATCT-CATAAGGCAAAATGCATCTGCTAGTCC 904 Query 111064 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTC-TCAACGG 111122 || | ||| | || ||||||||||||| ||||||| ||| || || ||||| | Sbjct 905 CTGTATACCAATTCCTATAGGTCTGTGTCTCATATTACTTCTTC-TACATTCTTCAACAG 963 Query 111123 GATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCAT 111182 ||||||| || | || || || ||| |||||| | |||| | ||| | | | | | Sbjct 964 GATAAAATGTTGTATCTATACATCTGTTAAGATTTCTTGTAATTA-CTT--TAACTACTT 1020 Query 111183 G---AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGA 111239 | ||||||||| | ||||| | || ||| ||||| | ||| || | | Sbjct 1021 GCGATAGTTTTTCAAAGTCAAA------TTTTTCATCAATGACA-AATTTTGACAAACAA 1073 Query 111240 TTGAT-GCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 111298 || | |||||||| ||||| || | |||| || || | || || | |||||| | | Sbjct 1074 ATGCTCGCCAAATTACAAACTGCTATTTCATTTTTGTCAGAATATTCGATAATTTCCGCA 1133 Query 111299 CATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCA 111358 || | || ||| || || || || ||||| | ||| ||||| | |||| || | Sbjct 1134 CAAAGATTTGAAGATTTTATTGTACCTAAATTTTGTTGATTACTTAGCCTGTTACAAGTG 1193 Query 111359 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417 || || || ||||| || || || ||||| || |||| || | ||| || ||||| Sbjct 1194 TCTTTATAAAGCATATAAGGTGTACCCGTTTCTAATTGTGCTTCTATAATGGCTTTCCA 1252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 625891682644800