Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq157294 147 3e-30 seq59246 102 9e-17 >seq157294 Length=2047 Score = 147 bits (162), Expect = 3e-30 Identities = 616/956 (64%), Gaps = 26/956 (3%) Strand=Plus/Minus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 |||||||| ||| | | | ||| || || |||||||| || |||||||| |||||| Sbjct 1252 TGGAAAGCCATTATAGAAGCACAATTAGAAACGGGTACACCTTATATGCTTTATAAAGAC 1193 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 | |||||| ||||||||| | ||||| ||| || || ||| ||||| ||| Sbjct 1192 ACTTGTAACAGGCTAAGTAATCAACAAAATTTAGGTACAATAAAATCTTCAAATCTTTGT 1133 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGC-ATCAAT 105066 | ||||| | |||| | | |||||| |||| | || || ||||| | || | || | Sbjct 1132 GCGGAAATTATCGAATATTCTGACAAAAATGAAATAGCAGTTTGTAATTTGGCGAGCATT 1073 Query 105067 CGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTC---CA 105123 | | | | || | ||| || || || | |||||| | ||||||||| || Sbjct 1072 TGTT-TGTCAAAATTTGT-----CATTGATGAAAA-ATTTGACTTTGAAAAACTATCGCA 1020 Query 105124 CGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCC 105183 | ||||| || | || | ||| || |||||| ||| |||| || ||||| || Sbjct 1019 AGTAGTTAAAGTAATT---ACAAGAAATCTTAACAGATGTATAGATACAACATTTTATCC 963 Query 105184 CGTTGA-GACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGG 105242 ||||| || || | | | | ||||||||||||| | || || || | ||| | |||| Sbjct 962 TGTTGAAGAATG-TAGAAGAAGTAATATGAGACACAGACCTATAGGAATTGGTATACAGG 904 Query 105243 GTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAA 105302 | || || |||| ||| ||| | | || ||||| | ||||| | || Sbjct 903 GACTAGCAGATGCATTTTGCCTTATGAGATATGCGTTTGACAGTCAAGAAGCAAGAGACT 844 Query 105303 TCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGG 105362 | ||| | |||||||| || |||||| | || | || | || || |||| Sbjct 843 TAAATTCAAAAATATTTGAAACGATGTATTTTTCTGCCTTGGAAGAAAGCGTTGAATTGG 784 Query 105363 CAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTC 105422 | | | ||| ||||| ||| | | ||| |||| || || ||||| | ||| Sbjct 783 CGAAAGAATTTGGACCATACGAATCATATGAAGGTTTGCCTA-TTAGCAAGGAATTTTTC 725 Query 105423 AATTTGATATGTG-GGAAGGTGAGACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAA 105481 | ||||| |||| |||| | | || || | |||||| ||| | ||| Sbjct 724 ATTTTGAATTGTGCGGAAAAAAAATTCCAGA--CATGGAAAATGGGAAAATCTTA--GAA 669 Query 105482 CGCA--TCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCT 105539 | | || | | || || | || ||| | | || ||||| ||||| || ||| Sbjct 668 TTAAAATAAAAAATCACGGCGTTAGGAATAGTTTATTAATTGCTCCTATGCCTACCGCCA 609 Query 105540 CCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATC 105599 ||| ||||||| || |||||||||||| |||||||| | || | ||||| || Sbjct 608 GTACCTCACAAATATTTAATAATAATGAATGTTTTGAACCTTTTACTTCCAACATTTACA 549 Query 105600 TGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCA 105659 ||| ||||| | || || || ||| |||||||| | || | || | || | | Sbjct 548 CGAGGAGAACACATGCTGGTGAATTTAAAATTGTCAATGAATATTTGTTGAAAGATTT-A 490 Query 105660 AAGAGATTGGTCTC-TGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCC 105718 | | ||| || ||||| | || ||||| || | || | || | ||||| Sbjct 489 ATTAAATTAAACTTGTGGTCACATGAAATGAAAAATTTAATCATTGAATATGAAGGTTCA 430 Query 105719 ATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAA 105778 |||||||||||| |||| |||||||| ||||| || | ||| |||| |||| || Sbjct 429 ATTCAAAATATTAAAAATATACCAAATGACATTAAAAAACTTTACAAAACAGCTTGGAAA 370 Query 105779 ATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCA 105834 || || ||||| |||| ||||| |||| ||||| ||| | ||||||||||| Sbjct 369 ATTAAAATGAAAAATGTAATTGATTTGGCGGCAGACCGTCAACTTTTCATTGATCA 314 >seq59246 Length=1357 Score = 102 bits (112), Expect = 9e-17 Identities = 234/350 (67%), Gaps = 12/350 (3%) Strand=Plus/Minus Query 104907 CTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTA 104966 ||||| ||||||||||||||||| ||| | || || || || || ||| ||||||| Sbjct 422 CTCAAGTGGAGACTGGTACACCATATATGTTGTATAAGGATGCTTGCAACAGGAAGAGTA 363 Query 104967 ATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTA 105026 ||||||| ||| | || || || || |||||| || || || | || ||| | Sbjct 362 ATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACA 303 Query 105027 CAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGG 105086 | || |||| ||| ||||| ||||| || || || || || || || ||| | Sbjct 302 CTTCAGAAAATGAAGTGGCAGTGTGCAACCTTGCTTCCATAGCACTTAACATGTTTGTTG 243 Query 105087 ATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCA 105146 | | | || | |||| ||| | ||||| | | ||| || || | ||| || Sbjct 242 A-----AAATAATCA-ATTTCATTTTAAAAAATTAAAAGAAACCACTAAGATTGTGACTC 189 Query 105147 AAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAAT 105203 |||| |||||| ||| |||||| || ||||| || || ||| || | | Sbjct 188 AAAATTTAAACAAAGTCATTGATGTTAACTTTTATCCTGTCCCTGA---AGCAAAAACTT 132 Query 105204 CTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGAT 105253 | |||||||| |||||||| || ||| | |||||||||||| | || ||| Sbjct 131 CAAATATGAGGCACCGTCCTATCGGTATTGGTGTTCAGGGTATGGCAGAT 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581273061775120