Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq24578 82.4 4e-11 >seq24578 Length=4592 Score = 82.4 bits (90), Expect = 4e-11 Identities = 258/397 (65%), Gaps = 7/397 (2%) Strand=Plus/Plus Query 65748 GTGAAACAAATTAATACACAACCCTTTAATATGATGACCATCCAAATCCGCGTCTGTCAT 65807 || ||| ||||||||| ||| |||||||| |||| || || ||| |||||||| Sbjct 2090 GTCAAAAAAATTAATAAGCAATCCTTTAATGTGATTTCCGTCATGATCTTGATCTGTCAT 2149 Query 65808 AATAAGAACACGACCATATCTCAAATCATTTGTATCACTGTATTCACGACCAGTTTCCAA 65867 || | | | ||||||| || | ||||| | ||||| | | | | Sbjct 2150 TATCATGATATGACCATACCTTAGGCTTGAAGTATCCTTATATTCTTTATTATGCTGTAG 2209 Query 65868 ACCAAGTAtttttttAATTTCAGCAATTTCCTTGTTTTCACTAATCTTTTTGAT---GTT 65924 ||||| ||||||||| | | |||||| ||||| ||| | ||| | | Sbjct 2210 ACCAATTATTTTTTTCAAAGCGATAATTTCAGGATTTTCTAGAATTTGTTTATTAGAGGC 2269 Query 65925 TTCACCACGCACATTTAATATTTTCCCCTTCATTGGATATACACCATAAGAATTTCTATC 65984 ||| | | || ||||| | || ||||| | |||| | |||||||| ||| ||| | Sbjct 2270 TTCCCTA---ACGTTTAAAAGCTTTCCCTTTAGTGGAAAAACACCATACAAATCTCTTCC 2326 Query 65985 TTCTGAAGAGAGACCAGAAACAATACCGGCTTTTGCGGAATCTCCTTCACAAAAGATAAT 66044 | | | ||||| |||| | ||| ||||||||||||||| | |||| Sbjct 2327 AACCACACTCAAACCAGCAACAGCTAGAGTTTTAGCGGAATCTCCTTCAGTCAGAATAAG 2386 Query 66045 AGTGCATTCAGATGAACGTTCAGTTCCTGCCCAATTGGCATCAATCAATTTTGGAATTCC 66104 || |||| |||||| || ||||||| |||| ||||| || || |||||||| Sbjct 2387 CGTACATTTTGATGAA-TTTTTTTTCCTGCATAATTTGCATCTTCTAACTTCGGAATTCC 2445 Query 66105 ACGGATATTTTTCGTTTTAGTTCCATCCGtttttttt 66141 | ||| ||| | ||||||| ||||| ||||||||| Sbjct 2446 AACGATTTTTGTAGTTTTAGCACCATCTGTTTTTTTT 2482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 234896888240700