Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_028696.2 Length=41338 Score E Sequences producing significant alignments: (Bits) Value seq271029 479 7e-131 seq177630 315 2e-81 seq249728 224 3e-54 seq262377 116 1e-21 >seq271029 Length=527 Score = 479 bits (530), Expect = 7e-131 Identities = 431/544 (79%), Gaps = 20/544 (4%) Strand=Plus/Plus Query 1137 TCTCAATTCTGACGTTTACCCCGCTGATGGGGATGTCTGACGTTGTTACCAAGTTCCTGA 1196 |||| | ||||| || |||||| | ||||| ||||| ||||| || || |||||| | | Sbjct 1 TCTCTTTGCTGACCTTCACCCCGTTAATGGGTATGTCAGACGTCGTAACGAAGTTCATAA 60 Query 1197 AGAATCCCAGCAAGTCGCAGAAAGTGGTCAACATGACCATCTATGACGCTGAGCACTATA 1256 |||| || |||||| |||||| |||||||| ||||||||||||||||| || ||||| | Sbjct 61 AGAACCCTAGCAAGATGCAGAAGGTGGTCAATATGACCATCTATGACGCCGACCACTACA 120 Query 1257 CCGACGAGCAGAAAGAGCAAATCATCGCATCCTATCCTGAGCATGAGAGAGAGGCGCGTG 1316 ||||||||||||||||||||||||| || || ||||||||||||||| | || ||||||| Sbjct 121 CCGACGAGCAGAAAGAGCAAATCATTGCCTCTTATCCTGAGCATGAGCGTGAAGCGCGTG 180 Query 1317 CTCGCGGTATTCCTACGATGGGTAGCGGTCGAATATTCCAGATACCGGAAGAGACGATTA 1376 | || ||||| || || |||||||||||| | || | ||| ||||| ||||| || || | Sbjct 181 CGCGGGGTATACCGACAATGGGTAGCGGTAGGATTTACCAAATACCTGAAGAAACTATCA 240 Query 1377 AGTGCCAGCCGTTTGAGTGTCCCGATCACTTCTATGTTATCGACGCTCAGGACTTCGGCT 1436 |||||||||||||||| ||||||||||||||||| |||||||||| || ||||| |||| Sbjct 241 AGTGCCAGCCGTTTGAATGTCCCGATCACTTCTACGTTATCGACGGGCAAGACTTTGGCT 300 Query 1437 GGAACCACCCGCAAGCTCACATTCAGCTTTGGTGGGACAAAGACGCAGATGTTTTCTATC 1496 |||| ||||||||| |||| |||| ||||| || ||||||| Sbjct 301 GGAATCACCCGCAA--TCAC------------NNGGACGAAGAC------GTCTTCTATC 340 Query 1497 TGGCGCGTGTGTGGAAGAAATCAGAGAACACCGCAGTTCAGGCATGGGGTGCTGTTAAGT 1556 | || || |||||||||||||| |||||||| || || ||||| ||||| ||| ||||| Sbjct 341 TTGCTCGAGTGTGGAAGAAATCTGAGAACACTGCTGTGCAGGCTTGGGGGGCTACTAAGT 400 Query 1557 CGTGGGCTAACAAAATACCTGTCGCGTGGCCTCATGACGGTCACCAACACGAAAAGGGCG 1616 | ||| | ||||| |||||||| || |||||||| || || ||||||||||| || |||| Sbjct 401 CATGGTCCAACAAGATACCTGTGGCTTGGCCTCACGATGGACACCAACACGAGAAAGGCG 460 Query 1617 GTGGTGAGCAACTTAAAACCCAATATGCGGACGCTGGGTTCTTTATGCTTCCCGATCACG 1676 | |||||||| || || | ||||| || |||||||| ||| | ||| | || || || | Sbjct 461 GCGGTGAGCAGCTGAAGAAACAATACGCCGACGCTGGCTTCATGATGTTACCGGAGCATG 520 Query 1677 CAAC 1680 | || Sbjct 521 CCAC 524 >seq177630 Length=801 Score = 315 bits (348), Expect = 2e-81 Identities = 564/827 (68%), Gaps = 40/827 (5%) Strand=Plus/Plus Query 6587 CCTGAGCAACGGGCATACGCCAACGTTAACACCTCGCTGGCTGATGCAATGGCGGTGAAC 6646 || ||| |||| | || |||||||| ||||| |||| |||||| | ||| | ||| Sbjct 1 CCAGAGTAACGCACTTATGCCAACGTGAACACTACGCTTGCTGATAAGACGGCAATCAAC 60 Query 6647 ATCCTGAACGTT--AAGGATGCTCGCACCAACGTGTTCTGGGCTGATGACGCCATCCGTA 6704 ||| ||||||| || | ||| || ||||| |||||||| ||||| | ||||||| Sbjct 61 ATCTTGAACGTGGCAACG--GCTAAAACTAACGTTTTCTGGGCAGATGATTCTATCCGTA 118 Query 6705 TTGTGTCTCAGCCCATTCCGGCTAACCACGAACTGTTTGCAGGTATGAAAACTACCTCAT 6764 | ||||||||||| |||||||| ||| || |||||||| || |||||||| || || Sbjct 119 TCGTGTCTCAGCCTATTCCGGCCAACAGTGACCTGTTTGCCGGGATGAAAACGACTTCGN 178 Query 6765 TCAGCATCCCGGATGTCGGCCTTAACGGTATCTTCGCGACGCAGGGTGATATTTCCACCC 6824 || | ||||| ||||| || || | ||| Sbjct 179 NNNNNNNNNNNNNNNNNNN-----------TCATGGCGACTCAGGGCGACATCGCAACCT 227 Query 6825 TGTCAGGCCTGTGCCGTATTGCGCTGTGGTACGGCGTAAACGCGACACGACCGGAAGCAA 6884 || | || ||||||||||| |||||||| ||||| ||||| || || || ||||||| Sbjct 228 TGACCGGTAAATGCCGTATTGCTCTGTGGTATGGCGTCAACGCAACCCGCCCTGAAGCAA 287 Query 6885 TCGGTGTTGGCCTTCCTGGTCAGACTGCGTAACTAACAGGGGCTTCGGCCCCTTTCTTTA 6944 |||| || ||||| ||||||| || || ||| | | ||||||||||||||||| | | Sbjct 288 TCGGCGTGGGCCTCGCTGGTCAAACCGCTTAA-TCAATGGGGCTTCGGCCCCTTT-TCTT 345 Query 6945 TGGAGTGGCTATGAAAATAGCAATCTATAAGCCGGACGGAAGCGT-CATGGTATGGGGCG 7003 || || | |||| | | |||| | ||||| || || || ||| || || ||||| | Sbjct 346 TGAGGTCGATATGGACACAGCAGTATATAAACCAGATGG-CCCGTGCAAAGTCTGGGGAG 404 Query 7004 TAATGGCTCAGATGAAGGTCATCGACTCCAGCGAACTTCCCGAATATGTCAAAGATGGCT 7063 | |||||||| | || || | ||| ||| || | | || ||||| || | Sbjct 405 TTATGGCTCACGTCAAAATCGTTGACCATGCCGAGGTTGATAAGCACGTTAAAGACGGAT 464 Query 7064 GGCTTGACCATCCTTCAAAGTTGCTGTCCTCGGAAGCGGGCGATGCTAAGCCGCGCAAAG 7123 |||| |||||||| |||||| | || ||| | |||||| |||||||| Sbjct 465 GGCTAGACCATCCATCAAAG-------CTTCTTGAGC-----AACCTAAGCGGCGCAAAG 512 Query 7124 GACGTAAGCCCAAGGCGGTAAGCGATGCAGATAAAGACTAAAGGCGATCTGGTCAGGGCG 7183 |||||| ||| | |||||| || |||| || || || | || | ||| Sbjct 513 ---------CCAAGGTGGTGACCGATGCTGACTCAGACGAAGGGTGACATTGTTCGTGCG 563 Query 7184 GCGCTGCGTAAGCTGGGCGTAGCATCAGATGCAACTCTCACTGATGTTGAGCCACAGTCT 7243 || ||||| ||||| || | || || || || || || |||||||| |||||||| || Sbjct 564 GCACTGCGCAAGCTAGGTATCGCCTCTGACGCCACGCTAACTGATGTCGAGCCACAATCA 623 Query 7244 ATGCAGGATGCTGTTGACGACCTTGAAGCGATGATGGCTGAGTGGTATCAGGACGGAAAG 7303 ||| |||| | ||| ||||||| ||| |||||||||||| |||||||||||||| Sbjct 624 ATGGAGGACGGCGTTAACGACCTCGAAATGATGATGGCTGAATGGTATCAGGACGGTCGA 683 Query 7304 GGCATCATCACCGGCTATGTATTCTCAGATGATGATAATCCTCCCGCTGAAGGTGATGAT 7363 || || ||||| ||||| | || | |||| || ||||||| || |||||||| || Sbjct 684 GGGATTATCACTGGCTACGCTTTTGCTAATGACGACGATCCTCCGGCAGAAGGTGACGAC 743 Query 7364 CACGGTCTTCGCTCAAGCGCAGTCAGCGCAGTATTCCACAATCTGGC 7410 ||| | || || ||| | | ||||||||| |||| || || || Sbjct 744 CACTCGATGCGGTCTAGCTCGATTAGCGCAGTAGTCCATAACCTCGC 790 >seq249728 Length=458 Score = 224 bits (248), Expect = 3e-54 Identities = 329/464 (71%), Gaps = 25/464 (5%) Strand=Plus/Minus Query 3059 CAGAATGGTTGGGAGGATTTCGCAGAAAAATACGACCTCGATGCTGATGATATTCCATCA 3118 ||| ||||||||||| ||||| ||| |||| | ||||| | || || | || Sbjct 441 CAGGATGGTTGGGAGTCATTCGCTGAAGAATATGGACTCGACCCAGACGAAAAGCCTAGC 382 Query 3119 TTCCAGAACCCCAACGATTGGGTATTTCCCTGGCTGACGCAGGA-CACAATTCAGATCGC 3177 || || ||||||||||||||||| || |||||||| ||| | | | | | ||||| Sbjct 381 TTTCAATCTCCCAACGATTGGGTATTCCCTTGGCTGAC-CAGTAACTCGCTGTATATCGC 323 Query 3178 TGAGTTTTACGAAGTGGTCGAGAAGAAAGAGACGGCGTTTATCTACCAAGATCCAGTTAC 3237 ||||| ||||||||| | |||||||||||| || | |||||| | || || | || Sbjct 322 TGAGTATTACGAAGTCGAAGAGAAGAAAGAGGTCGCTTACATCTACGAGGACCCGCTAAC 263 Query 3238 GGGTGAGCCGGTAAGCTACTTTAAGCGCGATATTAAAGACGTCATTGACGACCTGGCTGA 3297 |||||||| || |||||||| |||||| | ||| ||||| Sbjct 262 CGGTGAGCCAGTTAGCTACTTCAAGCGCA------------TGCTTGCCGACC------- 222 Query 3298 TAGTGGATTTATCAAAATTGCAGAGCGCCAGATTAAGCGTCGCCGGGTATACAAATCGAT 3357 |||| | | || |||| ||| ||||||| || ||| |||| || ||| |||| Sbjct 221 --GTGGCATGAAGAAGATTGGCGAGAAGAAGATTAAACGCCGCAGGGTGTATAAAACGAT 164 Query 3358 TATCACCTGCACTGCTGTACTCAAAGACAAGCAGCTC-ATTGCTGGCGAGCATATCCCCA 3416 | |||| | | || ||| | |||||| ||| | || || || |||||| | || | Sbjct 163 TCTCACATCTTCCGCAGTATTGAAAGACC-GCACATTGATAGCCGGTGAGCATCTGCCGA 105 Query 3417 TTGTTCCGGTATTCGGAGAGTGGGGCTTCGTTGAAGATAAAGAAGTGTATGAGGGTGTCG 3476 |||| || || ||||| |||||||| ||||| || ||||||||||| ||||||||| ||| Sbjct 104 TTGTGCCAGTGTTCGGCGAGTGGGGATTCGTCGAGGATAAAGAAGTCTATGAGGGTATCG 45 Query 3477 TCCGCCTGACAAAAGACGGTCAGCGTCTGCGCAACATGATTATG 3520 | | ||||| |||||||| ||||| |||||||||||||||||| Sbjct 44 TTAGGCTGACGAAAGACGGCCAGCGACTGCGCAACATGATTATG 1 >seq262377 Length=537 Score = 116 bits (128), Expect = 1e-21 Identities = 227/329 (69%), Gaps = 6/329 (2%) Strand=Plus/Plus Query 8485 ATGGAGACGTTGAGGTTCGACTCTCATGAACTGCTGATTATCCATCTCCCGCGTCATGTG 8544 |||||| | || | ||||| ||| || || | || ||||| || ||| | |||| Sbjct 210 ATGGAGTCCTTACGATTCGATGGTCACGAGCTAATCATCATCCACCTACCGAATGATGTA 269 Query 8545 CTGGTTTACGATGCCTCATCAAGCCAGAACGGGCCGCAATGGTGCGTACTGAAAACAGGT 8604 || || || |||||| |||| |||||||| |||||||||| | |||||||| || Sbjct 270 CTTTGCTATGACGCCTCAGCAAGTCAGAACGGTCCGCAATGGTCAATCCTGAAAACTGGA 329 Query 8605 TTATACGACGATGTTTATCGCGCCATCGACTTCATGTACGAAGGCAACCAGATAACGTGC 8664 | || || | |||| || |||||||||||||| || || |||||||| || ||| Sbjct 330 CTCTATGATACTCCGCATCGTGCTATCGACTTCATGTATGAGGGTAACCAGATTACCTGC 389 Query 8665 GGCGATAAATCAGAAGCAGTGACAGGGCAGTTGCAATTCGACATTAGTAGT--CAGTACG 8722 || || || | || | ||||| ||| | | |||| | | | | | ||||||| Sbjct 390 GGAGACAAGACGCAATCTGTGACCGGGTA-TCTTAATTATGC-TCACTCATCACAGTACG 447 Query 8723 ACAAGCAGCAAGAACATATGCTGTTTACTCCCATCTTCAAGGCTGATAAC-GCCAGATGC 8781 || |||||||||| | || | || || | ||||||||||||||| || ||| Sbjct 448 ACGCAGAGCAAGAACACCTTCTCTACACGCCACTTTTCAAGGCTGATAACAACCTGAT-A 506 Query 8782 TTCGATCTGGAAGTTGAATCCTCGACAGG 8810 |||||| | ||| | ||| | || ||||| Sbjct 507 TTCGATTTCGAATTAGAAGCATCAACAGG 535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131732121922800