Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq38040 111 1e-19 seq22409 82.4 5e-11 >seq38040 Length=2861 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||| ||||| ||||| || ||| ||||| | || || ||| | Sbjct 2691 ATGCAAATTTTTGTTAAAACACTTACAGGAAAAACAATTACGTTAGAAGTTGAAGCTTCT 2632 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || | ||| || || ||||| ||||||||||| |||| || | Sbjct 2631 GACACAATTGAAAAT--GTTAAGGCTAAAATTCAAGACAAAGAAGGCATTCCTCCAGATC 2574 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| || |||||||| ||||| |||||||| |||| |||| | | ||||| |||| Sbjct 2573 AACAACGTTTGATTTTTGCTGGAAAGCAATTGGAAGACGGCCGCACCCTTTCCGACTACA 2514 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||| |||||||| ||| | || |||| |||||||||| || || Sbjct 2513 ACATTCAAAAAGAATCCACCCTCCACCTGGTGCTGCGTTTGCGAGGAGG 2465 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| || || || || |||||| ||| ||| | || || ||| | | Sbjct 1779 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTGGAACCCTCA 1720 Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909 ||| | | || || ||| || || |||||||| ||| |||| || || Sbjct 1719 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 1660 Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969 ||||| ||||||| || || || || |||| || | |||| |||| || |||||| Sbjct 1659 CAACGTCTAATTTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 1600 Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||||||| ||||||||||| || | ||| | || || || Sbjct 1599 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTCTTCGCGGTGG 1553 >seq22409 Length=1756 Score = 82.4 bits (90), Expect = 5e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||||||||| || || || ||||| || ||| ||||| | || || ||| | | Sbjct 1664 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAAGCCTC 1605 Query 27849 CGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCA 27908 || | || || || ||| ||||| || || |||||| |||| || || Sbjct 1604 TGATACTATAGAAAATGTAAAAGCGAAAATTCAAGATAAGGAAGGTATTCCACCAGACCA 1545 Query 27909 GCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAA 27968 |||||| || || ||||| || ||||| | || || | ||| | ||||| || ||||| Sbjct 1544 GCAACGTTTGATCTTTGCTGGTAAACAGCTAGAAGATGGACGTACATTGTCTGACTACAA 1485 Query 27969 CATCCAAAAAGAGAGCACTTTGCAT 27993 ||| ||||| || ||| |||||| Sbjct 1484 CATTCAAAAGGAATCCACATTGCAT 1460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354679949091426