Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq146516 105 6e-18 seq98588 89.7 4e-13 seq80369 87.8 2e-12 >seq146516 Length=3606 Score = 105 bits (116), Expect = 6e-18 Identities = 219/321 (68%), Gaps = 10/321 (3%) Strand=Plus/Plus Query 14715 AATTTGATAGCTACAACGATTACGTGGTGGCGGCGACATATTTTGACGGAAAGAAGGTGA 14774 ||||||| | ||||| |||||| | ||||| || |||||||| |||| | | Sbjct 2285 AATTTGACAAATACAATGATTACATTGTGGCCTTGAATTATTTTGATTCAAAGTCTATCA 2344 Query 14775 ACTACAACAGCGGTTTGTTTTACTATGTTCTGTGGAAATTGTGCAGCGCCAAAAAGTGGA 14834 | ||||| | ||||||||||| ||||| |||||||| | || | ||||| |||| Sbjct 2345 AATACAATAAGGGTTTGTTTTATTATGTACTGTGGAAGATATGTGATGGTAAAAAATGGA 2404 Query 14835 TGAACCAAAATGTGCTTGACCAATT--TTGGAAATACGTTAAACTTCGCTTACAAAACAC 14892 || | |||||||| | || |||| | | ||| ||||| | |||| || || Sbjct 2405 TGGATCAAAATGTTGTAGAAAAATTCAAAGAATATATGTTAAGGCGTG-TTACCGAA-AC 2462 Query 14893 TACATGCAAGCTAGGTCTTTCGTCGCTTCCTATGGACCCGCCCATGAAAACATCACTACT 14952 | |||| | | ||||| | || |||||| |||| || || |||| ||||| | Sbjct 2463 AAAATGCTATATTGGTCTGACCTCTCTTCCTTTGGATCCCTTAATTCAAACGTCACTGCC 2522 Query 14953 AACAGCCCTGTGGTACTGTGTTGAGTTGTCGTCCGACATATTTAAACAC---GACCAATT 15009 |||| || ||||| ||||| || | || || ||||||||||| || ||| | || Sbjct 2523 TGCAGCGCTCTGGTATTGTGTAGAAATTTCATCATACATATTTAAAGACGATGACGAGTT 2582 Query 15010 ACATTACACCAATGAAAGACT 15030 |||| |||| |||||||| Sbjct 2583 ---TTACTCCAAAGAAAGACT 2600 >seq98588 Length=355 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || || ||||| || || || |||||||| || || || |||| ||| || || | Sbjct 328 CGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGACCA 269 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTT 39188 || || | || || || ||||| |||||||||||||| || |||||| | || |||||| Sbjct 268 TCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG-ATGCCCTCTTT 210 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 ||| |||||| ||| | | | | ||||| | ||||| |||| || || Sbjct 209 GTCTTGGATTTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAAT 150 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||| || || ||||||||||| || ||||| Sbjct 149 GGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 114 >seq80369 Length=3501 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 39072 TAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTC 39131 |||||| | ||| || || || || || || ||||| ||||| | || |||| | || Sbjct 405 TAACACAAGATGCAGTGTACTTTCCTTCTGGATATTGTAATCAGATAGCGTTCTAGCATC 346 Query 39132 ATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTC 39191 || || || || || ||||| ||||| | |||||| || | || | || ||| ||||| Sbjct 345 CTCGAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTC 286 Query 39192 CATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACT 39251 || || ||| | || | | ||||| || ||||| || |||| || || | Sbjct 285 TTCTATCTTTGCTTTTACATTCTCGATAGTATCACTAGACTCTACTTCCAATGTTATTGT 226 Query 39252 TTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || | |||||||||||||| ||||| Sbjct 225 CTTTCCTGTTAATGTTTTAACAAAGATCTGCAT 193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428118316350494