Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq146516 105 6e-18
seq98588 89.7 4e-13
seq80369 87.8 2e-12
>seq146516
Length=3606
Score = 105 bits (116), Expect = 6e-18
Identities = 219/321 (68%), Gaps = 10/321 (3%)
Strand=Plus/Plus
Query 14715 AATTTGATAGCTACAACGATTACGTGGTGGCGGCGACATATTTTGACGGAAAGAAGGTGA 14774
||||||| | ||||| |||||| | ||||| || |||||||| |||| | |
Sbjct 2285 AATTTGACAAATACAATGATTACATTGTGGCCTTGAATTATTTTGATTCAAAGTCTATCA 2344
Query 14775 ACTACAACAGCGGTTTGTTTTACTATGTTCTGTGGAAATTGTGCAGCGCCAAAAAGTGGA 14834
| ||||| | ||||||||||| ||||| |||||||| | || | ||||| ||||
Sbjct 2345 AATACAATAAGGGTTTGTTTTATTATGTACTGTGGAAGATATGTGATGGTAAAAAATGGA 2404
Query 14835 TGAACCAAAATGTGCTTGACCAATT--TTGGAAATACGTTAAACTTCGCTTACAAAACAC 14892
|| | |||||||| | || |||| | | ||| ||||| | |||| || ||
Sbjct 2405 TGGATCAAAATGTTGTAGAAAAATTCAAAGAATATATGTTAAGGCGTG-TTACCGAA-AC 2462
Query 14893 TACATGCAAGCTAGGTCTTTCGTCGCTTCCTATGGACCCGCCCATGAAAACATCACTACT 14952
| |||| | | ||||| | || |||||| |||| || || |||| ||||| |
Sbjct 2463 AAAATGCTATATTGGTCTGACCTCTCTTCCTTTGGATCCCTTAATTCAAACGTCACTGCC 2522
Query 14953 AACAGCCCTGTGGTACTGTGTTGAGTTGTCGTCCGACATATTTAAACAC---GACCAATT 15009
|||| || ||||| ||||| || | || || ||||||||||| || ||| | ||
Sbjct 2523 TGCAGCGCTCTGGTATTGTGTAGAAATTTCATCATACATATTTAAAGACGATGACGAGTT 2582
Query 15010 ACATTACACCAATGAAAGACT 15030
|||| |||| ||||||||
Sbjct 2583 ---TTACTCCAAAGAAAGACT 2600
>seq98588
Length=355
Score = 89.7 bits (98), Expect = 4e-13
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129
|| || ||||| || || || |||||||| || || || |||| ||| || || |
Sbjct 328 CGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGACCA 269
Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTT 39188
|| || | || || || ||||| |||||||||||||| || |||||| | || ||||||
Sbjct 268 TCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG-ATGCCCTCTTT 210
Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248
||| |||||| ||| | | | | ||||| | ||||| |||| || ||
Sbjct 209 GTCTTGGATTTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAAT 150
Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| ||||| || || ||||||||||| || |||||
Sbjct 149 GGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 114
>seq80369
Length=3501
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 39072 TAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTC 39131
|||||| | ||| || || || || || || ||||| ||||| | || |||| | ||
Sbjct 405 TAACACAAGATGCAGTGTACTTTCCTTCTGGATATTGTAATCAGATAGCGTTCTAGCATC 346
Query 39132 ATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTC 39191
|| || || || || ||||| ||||| | |||||| || | || | || ||| |||||
Sbjct 345 CTCGAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTC 286
Query 39192 CATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACT 39251
|| || ||| | || | | ||||| || ||||| || |||| || || |
Sbjct 285 TTCTATCTTTGCTTTTACATTCTCGATAGTATCACTAGACTCTACTTCCAATGTTATTGT 226
Query 39252 TTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||||| || | |||||||||||||| |||||
Sbjct 225 CTTTCCTGTTAATGTTTTAACAAAGATCTGCAT 193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428118316350494
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |