Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq38040 143 2e-29 seq98588 134 9e-27 seq49094 96.9 2e-15 seq60889 84.2 1e-11 >seq38040 Length=2861 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| |||||||| || || |||||||| || || | |||||||| | | Sbjct 2691 ATGCAAATTTTTGTTAAAACACTTACAGGAAAAACAATTACGTTAGAAGTTGAAGCTTCT 2632 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||||| | |||| | |||| || ||||||||||| | || |||||||| Sbjct 2631 GACACAATTGAAAATGTTAAGGCTAAAA-TTCAAGACAAAGAAGGCATTCCTCCAGATCA 2573 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||||| || ||||| || || ||| ||||||||| ||||| | ||| ||||| Sbjct 2572 ACAACGTTTGATTTTTGCTGGAAAGCAATTGGAAGACGGCCGCACCCTTTCCGACTACAA 2513 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| |||||||| ||||| | || | || | | ||||||||||| Sbjct 2512 CATTCAAAAAGAATCCACCCTCCACCTGGTGCTGCGTTTGCGAGGAGG 2465 Score = 129 bits (142), Expect = 4e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || ||||| || ||||| ||||| | ||||| || || | Sbjct 1779 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTGGAACCCTCA 1720 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||||| | ||||| | || | | |||||||| ||| | || |||||||| Sbjct 1719 GACACTATTGAAAATGTTAAAGCCAAGA-TCCAAGACAAAGAGGGTATTCCCCCAGATCA 1661 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| |||| || || || || || ||||| || | |||||| | || ||||| Sbjct 1660 ACAACGTCTAATTTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAA 1601 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| |||||||| || || || |||||||| Sbjct 1600 CATCCAAAAAGAATCTACTTTGCATTTAGT 1571 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || || || || ||||| || || ||||| || || || | | Sbjct 2463 ATGCAAATATTTGTCAAGACACTAACAGGAAAGACCATAACTCTAGAGGTGGAGCCATCT 2404 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||||| |||| ||||| |||||||||||| | || ||||||||| Sbjct 2403 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATCCCTCCAGATCAA 2344 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||| || || ||| ||||||| | ||||| || || ||||| Sbjct 2343 CAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTATCTGACTACAAT 2284 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| || || | || |||| | | ||||||||||| Sbjct 2283 ATTCAAAAAGAATCTACCCTTCACCTAGTACTGCGTTTGCGAGGAGG 2237 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || || || || ||||| || || ||||| || || || | | Sbjct 2235 ATGCAAATATTTGTCAAGACACTAACAGGAAAGACTATAACTCTAGAGGTGGAGCCATCT 2176 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| |||| || ||| || ||||| ||| | || ||||||||| Sbjct 2175 GATACCATTGAAAACGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCTCCAGATCAA 2116 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||||||||| || ||||||| | || || ||| || |||||| Sbjct 2115 CAACGTCTCATCTTTGCCGGCAAGCAGTTGGAAGATGGGCGTACCTTATCTGACTACAAC 2056 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| ||||| || | ||| | || || | ||||||| || Sbjct 2055 ATCCAAAAGGAGTCTACCCTTCATCTTGTACTACGTCTGCGAGGTGG 2009 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||| | || ||||| || || || || ||||| || | | Sbjct 2007 ATGCAAATATTTGTGAAAACATTGACAGGAAAGACCATTACCCTGGAAGTAGAACCATCT 1948 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | |||| | || || ||||| | || ||||| || Sbjct 1947 GACACAATCGAGAATGTGAAGGCTAAAA-TACAGGATAAGGAAGGCATCCCCCCAGACCA 1889 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | |||||||| || || ||| ||||||| | |||||||| |||||||| Sbjct 1888 ACAGCGTCTCATATTTGCTGGTAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAA 1829 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || ||||||||||| | || || || | | |||||||||| Sbjct 1828 TATTCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTGCGAGGAGG 1781 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 |||||||||||| | || ||||| |||||| | | || ||||| || |||||||||||| Sbjct 2826 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 2767 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || | || || || ||||| || || ||||| || || || |||||||||| || Sbjct 2766 GATGGCCGTACACTATCTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTATT 2708 >seq98588 Length=355 Score = 134 bits (148), Expect = 9e-27 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| ||||||||||| || ||||| || || ||||| ||||| || || | Sbjct 114 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 173 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| |||||| ||||| ||||| |||||||| || | || || ||||| Sbjct 174 GATACTATTGAAAACGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 233 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| || || ||| ||||||| | |||||| | ||| |||||| Sbjct 234 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGACTACAAC 293 Query 23791 ATACAAAAAGAGTCCAC 23807 || |||||||| || || Sbjct 294 ATTCAAAAAGAATCTAC 310 >seq49094 Length=1117 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| ||||| || || || || || || || || ||||| || ||||| || | | Sbjct 228 AATGCAAATTTTTGTAAAGACACTGACAGGCAAGACTATCACACTGGAAGTGGAAGCTTC 287 Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || |||||| | |||| |||||| || || ||||| || | || ||||||| Sbjct 288 TGATACAATTGAAAATGTTAAGGCAAAAA-TTCAGGATAAAGAGGGCATTCCCCCAGATC 346 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| | | || ||||| || || || || ||||| | |||||| || || |||| Sbjct 347 AACAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGACTACA 406 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 | || || || || || || || || ||||| || || || |||| ||| Sbjct 407 ATATTCAGAAGGAATCTACTTTGCACTTAGTACTACGGCTGAGAGGTGGA 456 Score = 93.3 bits (102), Expect = 3e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| |||||||| || || || ||||| ||||| | ||||| || | | Sbjct 1 ATGCAAATTTTTGTTAAAACACTGACCGGCAAAACTATCACATTGGAAGTGGAAGCTTCT 60 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | |||| ||| ||| ||||| ||||| | || ||||||||| Sbjct 61 GATACAATCGAGAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 120 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCAC 23774 || | ||||| || ||||| || ||||||||||| | |||||| Sbjct 121 CAAAGATTAATTTTCGCCGGAAAGCAACTGGAAGATGGACGCAC 164 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| |||||||||||||| || || || ||||| || ||| | || || || | | Sbjct 912 AATGCAAATTTTCGTTAAAACACTGACTGGTAAAACTATTACTTTAGAGGTGGAAGCTTC 971 Query 23670 GGACACTGTTG-AAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| | | |||| |||| | ||| ||| ||||| ||||| | || ||||| | Sbjct 972 TGACACAATCGAAAATGTTAAGGC-AAAGATTCAAGACAAGGAAGGCATCCCTCCAGACC 1030 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| | || || || || || || ||||||||||| | ||||| | || || | Sbjct 1031 AACAAAGATTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACACTGTCTGACTATA 1090 Query 23789 ACATACAAAAAGAGTCCACATTACATT 23815 |||| || || || || || || |||| Sbjct 1091 ACATCCAGAAGGAATCTACTTTGCATT 1117 >seq60889 Length=898 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 |||||||||||| | || ||||| |||||| | | || ||||| || |||||||||||| Sbjct 638 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 697 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || | || || || ||||| || || ||||| || || || |||||||||| || Sbjct 698 GATGGCCGTACACTATCTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTATT 756 Score = 84.2 bits (92), Expect = 1e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| |||||||| || || |||||||| || || | |||||||| || | Sbjct 773 ATGCAAATTTTTGTTAAAACACTTACTGGAAAAACAATTACGTTAGAAGTTGAGGCCTCT 832 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||||| |||| ||||| ||||||||||| | || ||||||||| Sbjct 833 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 892 Query 23731 CAGCGT 23736 || ||| Sbjct 893 CAACGT 898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 336886469940104