Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq38040 150 4e-31 seq49094 147 5e-30 seq22409 136 9e-27 seq98588 116 9e-21 seq211637 104 6e-17 seq60889 104 6e-17 seq1319 104 6e-17 seq106450 84.2 5e-11 seq102239 84.2 5e-11 >seq38040 Length=2861 Score = 150 bits (166), Expect = 4e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || | || | ||| ||||||||||||| ||||| || | || ||| Sbjct 1559 CGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTG 1618 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || |||||||| |||||||| || || |||||||| || || |||||||| Sbjct 1619 CGGCCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGGAATACCC 1678 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || |||||||||||||| || ||| ||| || |||||||||| |||||| ||||| Sbjct 1679 TCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCCACTTCTAAT 1738 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || || | || |||| || | ||||| Sbjct 1739 GTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 1779 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || ||||| || || ||||||||||| | |||||| || | | || | ||||| Sbjct 2251 CAGTACTAGGTGAAGGGTAGATTCTTTTTGAATATTGTAGTCAGATAGGGTGCGACCATC 2310 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| | ||||| ||||| |||||||| |||||||| || || || |||||||| ||||| Sbjct 2311 TTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGGATACCTTCTTTGTC 2370 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||| || ||| ||| ||| || ||||| || | ||||| |||| || || || Sbjct 2371 TTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGATGGCTCCACCTCTAGAGTTATGGT 2430 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| || || | || || | || | |||||| Sbjct 2431 CTTTCCTGTTAGTGTCTTGACAAATATTTGCAT 2463 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || |||||||| |||||||||||||| | ||||| |||| | || | || || Sbjct 2479 CAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTC 2538 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| | ||||| ||||| || || | |||||||| || || ||||| ||||| ||||| Sbjct 2539 TTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCTTTGTC 2598 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||| || || ||| ||| ||| || ||||| || | ||| || |||||||| || || Sbjct 2599 TTGAATTTTAGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAACGTAATTGT 2658 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||||| | || | |||||| Sbjct 2659 TTTTCCTGTAAGTGTTTTAACAAAAATTTGCAT 2691 Score = 111 bits (122), Expect = 4e-19 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || | || ||||| ||||| ||||| | ||| ||||| | | || Sbjct 2699 CGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTA 2758 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||||| || || || ||||| || || || | |||||||| || ||||||||| Sbjct 2759 CGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCT 2818 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTC 225653 || ||||||||||||||| ||||||| ||| || ||||| Sbjct 2819 TCTTTGTCTTGGATCTTTGCCTTCACATTTTCAATTGTGTC 2859 >seq49094 Length=1117 Score = 147 bits (162), Expect = 5e-30 Identities = 152/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 225516 AGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCC 225575 ||| ||||| || |||| || || || | || || | ||||||||| || ||||| || Sbjct 1110 AGTAGATTCCTTCTGGATGTTATAGTCAGACAGTGTGCGCCCATCTTCCAGTTGCTTTCC 1051 Query 225576 AGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTT 225635 |||||| || | || ||||||||| || || || |||||||||||||| |||||| ||| Sbjct 1050 AGCGAAAATCAATCTTTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGAATCTTTGCCTT 991 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 ||| |||||| ||||| || | |||||| ||||| || || || || || |||| || Sbjct 990 AACATTTTCGATTGTGTCAGAAGCTTCCACCTCTAAAGTAATAGTTTTACCAGTCAGTGT 931 Query 225696 TTTTATGAACACTTGCATT 225714 ||| | ||| | ||||||| Sbjct 930 TTTAACGAAAATTTGCATT 912 Score = 145 bits (160), Expect = 2e-29 Identities = 164/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 ||| | ||| || | ||| | ||| ||||| || || | ||| ||||| | || || | Sbjct 675 AAGGCGCAGCACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACG 616 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||||||||| || || || || ||||| | ||||||||||| ||||||||||| Sbjct 615 ACCATCTTCTAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATACCTTC 556 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 |||||||| || ||| ||| ||| ||| || || || || | |||||| || || || Sbjct 555 TTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGT 496 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| ||||| |||| || |||| || | ||||||| Sbjct 495 AATCGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 456 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| | ||| ||||| || || | ||| || || | || || | |||||| Sbjct 212 AGCACCAAGTGCAAAGTCGATTCCTTCTGAATATTATAGTCTGACAGTGTGCGTCCATCT 153 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || ||||| || | || |||||| || || ||||| |||||||||||| Sbjct 152 TCCAGTTGCTTTCCGGCGAAAATTAATCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCT 93 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || |||||| ||| || ||||| || || || | |||||| || || ||||| || Sbjct 92 TGAATCTTTGCCTTTACGTTCTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTT 33 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||||| | || | |||||| Sbjct 32 TTGCCGGTCAGTGTTTTAACAAAAATTTGCAT 1 >seq22409 Length=1756 Score = 136 bits (150), Expect = 9e-27 Identities = 160/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||| || | |||||||| ||||| | ||||| || | ||| || | |||||| Sbjct 1452 AGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCT 1511 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 |||||||| || ||||| ||||| | ||||| ||||| || |||||||||||||| ||| Sbjct 1512 TCTAGCTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCT 1571 Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 || || ||| || || ||| ||| || || || |||| |||||| || | || || || Sbjct 1572 TGAAT-TTTCGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGT 1630 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || ||||| | || || | ||| | ||||||| Sbjct 1631 TTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 1664 >seq98588 Length=355 Score = 116 bits (128), Expect = 9e-21 Identities = 152/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| ||||| ||||||||||| | ||||| |||| | ||| Sbjct 335 ACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGT 276 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | ||||| ||||| |||||||| || || || || || || || || Sbjct 275 GCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCC 216 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 || ||||||||||| ||| || || || ||| || || || |||| |||||| || | Sbjct 215 CTCTTTGTCTTGGAT-TTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCACTTCCA 157 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTT 225698 || || ||||| || || | ||||| Sbjct 156 GAGTAATGGTCTTTCCAGTTAGGGTTTT 129 >seq211637 Length=348 Score = 104 bits (114), Expect = 6e-17 Identities = 100/127 (79%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795 ||||||| ||||| ||||| || ||||||||||||| ||||||||||| | | | Sbjct 46 TGGTAAGGTTCTTCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 105 Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854 |||||| || |||||||||||||||||||| |||| | | |||| || | || |||| Sbjct 106 CCGTCAATTCATTTGAGTTTTAACCTTGCGGCCGTACTCCCCAGGCGGTCGACTTAACGC 165 Query 7855 GTTAGCT 7861 ||||||| Sbjct 166 GTTAGCT 172 >seq60889 Length=898 Score = 104 bits (114), Expect = 6e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || | || ||||| ||||| ||||| | ||| ||||| | | || Sbjct 765 CGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTA 706 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||||| || || || ||||| || || || | |||||||| || ||||||||| Sbjct 705 CGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCT 646 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACA 225639 || ||||||||||||||| ||||||| Sbjct 645 TCTTTGTCTTGGATCTTTGCCTTCACA 619 >seq1319 Length=5356 Score = 104 bits (114), Expect = 6e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| ||| ||||| ||||||||||| ||||||||||| || | ||||| || ||||| | Sbjct 1625 ATACTTCTGGATGTCCAAAAAATCAAAATAAATGTTGGTATAAAATAGGGTCTCCTCCTC 1566 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 ||| || |||||||| |||||| ||||||| ||||||||||| Sbjct 1565 CTGCGGGGTCAAAAAATGAAGTATTTAAATTTCGATCAGTTAAAA 1521 >seq106450 Length=531 Score = 84.2 bits (92), Expect = 5e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| |||| || |||| |||| || ||||| ||| |||| ||||||| | ||||| Sbjct 47 CAAATTTATAATACTATTGTTACAGCTCATGCTTTTATTATATTTTTCTTCATAGTTATA 106 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || | || || | | || ||||||||||| || || ||||| | || |||| ||| Sbjct 107 CCTATCATAATTGATAGATTTGGAAATTGATTAGTCCCATTAATATTAGGAGCTCTTGAC 166 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGA 7707 || ||||| || | | || |||||||| |||||| Sbjct 167 ATAGCTTTCCCCCGAATAAATAATATAAGATTTTGA 202 >seq102239 Length=623 Score = 84.2 bits (92), Expect = 5e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||| || || ||||||||||| |||||||||||||| | |||||||| ||||| |||| Sbjct 37 TTCTGGGTGCCCAAAAAATCAAAATAAATGTTGATATAAAATAGGATCTCCTCCTCCTGC 96 Query 370732 TGGATCAAAAAAGCTAGTA 370750 ||||||||||| ||||| Sbjct 97 AGGATCAAAAAATGTAGTA 115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1188365480570772