Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq51813 235 4e-57 seq49094 102 7e-17 seq38040 96.9 3e-15 >seq51813 Length=3444 Score = 235 bits (260), Expect = 4e-57 Identities = 641/969 (66%), Gaps = 27/969 (3%) Strand=Plus/Minus Query 109140 CGCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTT 109199 ||| ||||| || ||||||||||| || | || || |||||||| | || | Sbjct 1331 CGCCTACTTCGTAGAATGGGGTGTCTATCCTAGAAAGTTCCCCGTGGATCGTATACCTAT 1272 Query 109200 GCCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAA 109259 || ||| | | |||||||| || || |||||||| || || ||||| |||||||| || Sbjct 1271 ACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCATAAA 1212 Query 109260 CGACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCG 109319 ||| | | ||| || |||||||| | || ||||||| || || |||| || Sbjct 1211 TGACAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAGCGGCCG 1152 Query 109320 CGACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGG 109379 || || || ||||| || || ||||| ||||| || | |||||||| |||||||| Sbjct 1151 TGAGGACTTTAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGG 1092 Query 109380 CGTGACCGCGTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTGATGGCGGCCAAATT 109439 || | | ||||||||||| |||||||||||||| || ||||| ||| | | ||| Sbjct 1091 ATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTCGGCCAATTAATGTC-ACTAAA-- 1035 Query 109440 GGCAAATCCTCACG----TTAAAATTCTACCGTCCATAGGCGGGTGGACGTTGTCGGACC 109495 ||| || | || | || ||||| || || || || ||||||||| | | || | Sbjct 1034 -ACAAGCCCGCCCGGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCCGATC 976 Query 109496 CGTTTTATTTTATGCACGATTCGGCGAAAAGAGCCACATTCGTTGAATCGGTGCGCGAAT 109555 | |||| ||| | ||| | || ||| | ||| || | || || || | Sbjct 975 CTTTTTTCTTTTTAGTTGATAAATCTAAGAGAACACGATTTGTGCAGTCAGTAAAGGAGT 916 Query 109556 TTTTACAAGTGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTTCCGGGCGGCA 109615 || | | | ||||||||||| || || || || || |||||||||||||| || |||| Sbjct 915 TTCTTCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTGGCA 856 Query 109616 AGGGTGCCAATCCGAGTCTCGGCGACGCA-ACG--CGCGACAGCAAAACGTACATTGCGT 109672 | ||||| || || ||||| | || | | | || || | ||| | | Sbjct 855 AAGGTGCTAACCCTGACCTCGGTAGCCCAGAAGATGGTGATTGC--TATGTAAGT----T 802 Query 109673 TGTTAAAAGAGTTGCGCGCCATGTTGGACGACTTGCAAACGGCCACCAA---CAAAACGT 109729 || | ||||| || || | ||| | || || || | || | || ||| | | Sbjct 801 TGATGAAAGAATTACGTGAGATGCTCGATGA---GCTCTCAGCTAAGAATGGCAAGAAAT 745 Query 109730 ACGAATTGACGAGCGCCATTAGCGCCGGTTACGATAAAATTGACGTGGTCGATTACGCGT 109789 |||||||||| || |||||| | || | |||||||| | || || || |||| Sbjct 744 ACGAATTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCA 685 Query 109790 CGGCGCAACAATATTTGGACAAAATATTTTTAATGACATACGATTTCAAAGGCGCTTGGT 109849 ||| ||| | ||| |||| | || || || |||| || || ||||| || || |||| Sbjct 684 AGGCTCAAAATTATATGGATCATATTTTCTTGATGAGCTATGACTTCAAGGGAGCCTGGT 625 Query 109850 CAAA-CACGGACTTAGGCTATCACACGACTGTGTACGCGCCCACGTGGAATCCAAACGAA 109908 |||| || ||| || |||| || | |||||||||| | |||||||| || ||| Sbjct 624 CAAATGACACTCTT-GGACATCAAACACCATTGTACGCGCCTGCATGGAATCCCAAGGAA 566 Query 109909 TTGTACACGACCGATGTGGCGGTCAAAGAGCTGTTCAAACAAAAAGTGTCGCCTaaaaaa 109968 ||||| | || | | || ||| | |||| ||| |||| ||||| || Sbjct 565 ACTTACACATCTGACTTCGGAGTAAAATATTTGTTGGCACAGGGAGTGAATCCTAAGAAG 506 Query 109969 aTTATAATTGGCGTAGCGATGTACGGCCGCGGCTGGACGGGCG-TCGTGCACGCCGACGA 110027 ||| || | || || || ||||| || || || ||||| |||| || || | ||| || Sbjct 505 ATTGTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGTTCATG-ATTACGAAGA 447 Query 110028 CGCGAATCCGTTTTTGGGCATCGCCTCCGGTCCCGTGGAAGGCACTTGGGAAAACGGCGT 110087 | | ||| || |||| ||| | || || || |||| |||||| || |||| || Sbjct 446 CAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCAAGACGGAGT 387 Query 110088 GGTGGACTA 110096 |||||| || Sbjct 386 GGTGGATTA 378 >seq49094 Length=1117 Score = 102 bits (112), Expect = 7e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088 ||||| ||||||||||||||| || |||||||| ||||| | || || |||||| Sbjct 666 CACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCATCTTC 607 Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148 | ||||| || ||| | |||||||| |||||||| || | ||||||||||| Sbjct 606 TAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATACCTTCTTTGTCTTG 547 Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTT 101208 ||||||| || |||| | | || || | | ||| | ||||| ||||| Sbjct 546 AATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTAATCGTTTT 487 Query 101209 GCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 ||| |||| ||| || | ||||||||||||| Sbjct 486 GCCAGTCAGTGTCTTTACAAAAATTTGCATT 456 >seq38040 Length=2861 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || ||||||| | | |||| ||| | || || ||||| |||||||||||||| | | Sbjct 1781 CCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGAC 1840 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| |||||||||||| || || ||| |||| || | ||||||||| ||| Sbjct 1841 AAAGTGCGACCATCTTCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGGGG 1900 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGT- 101190 | |||||| || || ||||| ||||||| | | || || | | ||| | Sbjct 1901 ATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATG--GTTCTA 1958 Query 101191 -TTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | |||||| || || || ||||||||||| | ||| |||||||| Sbjct 1959 CTTCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCACAAATATTTGCAT 2007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408299589079242