Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq22409 109 1e-18 seq49094 98.7 2e-15 seq38040 98.7 2e-15 seq98588 96.9 8e-15 seq80369 91.5 3e-13 >seq22409 Length=1756 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || |||||||| | || || || ||||| |||||||| || | || || | |||||| Sbjct 1452 AGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCT 1511 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 ||||| ||| || || ||||| | | |||||||| | | || |||||||| ||| Sbjct 1512 TCTAGCTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCT 1571 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| ||| ||| | |||| | || || || || || || ||||| ||| Sbjct 1572 TGAATTTTCGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTT 1631 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| || ||||| ||||| | |||||| Sbjct 1632 TTACCCGTAAGGGTCTTGACGAAAATTTGCATT 1664 >seq49094 Length=1117 Score = 98.7 bits (108), Expect = 2e-15 Identities = 148/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| || || || || || || ||||| | | || | |||||||||| Sbjct 663 CAAG-TGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCATCTTCTA 605 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || || || ||||||||||| ||||| | | || ||||| || ||||||| Sbjct 604 GCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATACCTTCTTTGTCTTGAA 545 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 ||||| || ||| | |||| | || ||| || ||||| | ||||| ||||||| Sbjct 544 TTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTAATCGTTTTGC 485 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || || ||||| || || | |||||| Sbjct 484 CAGTCAGTGTCTTTACAAAAATTTGCATT 456 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--G 151958 ||| | |||||| || || |||||||| || || | | || | ||||||||| || | Sbjct 1116 ATGCAAAGTAGATTCCTTCTGGATGTTATAGTCAGACAGTGTGCGCCCATCTTCCAGTTG 1057 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 |||| || ||||| || | || || ||||| | | ||| |||||||| |||||||| Sbjct 1056 CTTT--CCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGAATC 999 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 ||| || ||| | || | |||| ||| || || || | |||||||||||| || Sbjct 998 TTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACCTCTAAAGTAATAGTTTTACCA 939 Query 152079 GTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || ||||| | |||||| Sbjct 938 GTCAGTGTTTTAACGAAAATTTGCATT 912 >seq38040 Length=2861 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||||||||| |||||||| |||||||||||||| || | ||| || | ||||||| Sbjct 2024 AGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGATAAGGTACGCCCATCT 2083 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || ||||| ||||| || | || || || | | || || || || ||| Sbjct 2084 TCCAACTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGAGGAATACCCTCTTTATCT 2143 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || || | || | | | || || ||| || || ||||| ||||| Sbjct 2144 TGAATCTTAGCCTTTACGTTTTCAATGGTATCAGATGGCTCCACCTCTAGAGTTATAGTC 2203 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| || || | ||||| Sbjct 2204 TTTCCTGTTAGTGTCTTGACAAATATTTGCAT 2235 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| | |||||| ||||||||||||||||| || | | ||| | ||||| Sbjct 1568 AGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCC 1627 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || ||||| || || | || || || | | || || || || ||| Sbjct 1628 TCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCT 1687 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||| ||| | || | ||||||| || ||||| | || |||||| Sbjct 1688 TGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCCACTTCTAATGTGATAGTT 1747 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| || |||| |||||| Sbjct 1748 TTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 1779 >seq98588 Length=355 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| |||||||| |||||||| |||| | ||| | |||||||| | Sbjct 320 CAAG-TGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGACCATCTTCCA 262 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || |||||||| | |||||| || | | ||| || || || ||||| | Sbjct 261 ATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGA 202 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||| || | || | | || || || ||||| |||||||| || || | Sbjct 201 TTTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGTCTTTC 142 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || || || | |||||| Sbjct 141 CAGTTAGGGTTTTAACAAAAATCTGCAT 114 >seq80369 Length=3501 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||| || ||| || || ||||| |||||||| | || ||||| Sbjct 410 AGTCTTAACACAAGATGCAGTGTACTTTCCTTCTGGATATTGTAATCAGATAGCGTTCTA 351 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||| || || || || || ||||||||||||||||| || | | || || ||| Sbjct 350 GCATCCTCGAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATGCCCTCC 291 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || |||| || ||| ||| ||| |||| | | || | ||||||||| | || Sbjct 290 TTGTCTTCTATCTTTGCTTTTACATTCTCGATAGTATCACTAGACTCTACTTCCAATGTT 231 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || | || || || |||| |||||| Sbjct 230 ATTGTCTTTCCTGTTAATGTTTTAACAAAGATCTGCAT 193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1149790302748098