Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_031761.1
Length=131855
Score E
Sequences producing significant alignments: (Bits) Value
seq98588 125 6e-24
seq60889 118 9e-22
seq38040 118 9e-22
seq49094 111 1e-19
seq89394 89.7 4e-13
>seq98588
Length=355
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||| |||||||| ||||| | || || || |||||||| ||||| |||||||
Sbjct 114 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 173
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| || ||| | |||||| ||||| |||||||| ||| | || |||||
Sbjct 174 GATACTATTGAAAACGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 233
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
|| | ||||| | ||| || || |||||||||||| | ||| | |||| || ||
Sbjct 234 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGACTACAAC 293
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| |||||||||||||| || || || || |||||||| || |||||
Sbjct 294 ATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGTGGTGG 340
>seq60889
Length=898
Score = 118 bits (130), Expect = 9e-22
Identities = 109/136 (80%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 111193 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111252
||||||||||| ||||| || ||||| ||||| |||| ||| || |||||| |||||
Sbjct 638 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 697
Query 111253 GATT--CTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGT 111310
||| | | ||||| | ||||||||||| ||||| |||||||| ||||||||||| |
Sbjct 698 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTAT 755
Query 111311 TGCGTCTGCGCGGTGG 111326
||||||| ||||| ||
Sbjct 756 TGCGTCTTCGCGGCGG 771
>seq38040
Length=2861
Score = 118 bits (130), Expect = 9e-22
Identities = 109/136 (80%), Gaps = 4/136 (3%)
Strand=Plus/Minus
Query 111193 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111252
||||||||||| ||||| || ||||| ||||| |||| ||| || |||||| |||||
Sbjct 2826 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 2767
Query 111253 GATT--CTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGT 111310
||| | | ||||| | ||||||||||| ||||| |||||||| ||||||||||| |
Sbjct 2766 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTAT 2709
Query 111311 TGCGTCTGCGCGGTGG 111326
||||||| ||||| ||
Sbjct 2708 TGCGTCTTCGCGGCGG 2693
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||| |||||||| || | || || || ||||| || | || ||| ||
Sbjct 2463 ATGCAAATATTTGTCAAGACACTAACAGGAAAGACCATAACTCTAGAGGTGGAGCCATCT 2404
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
|| | ||| | ||||| ||||| ||||||||||| | || ||||||
Sbjct 2403 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATCCCTCCAGATCAA 2344
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 111277
||| | ||||| | ||| || || |||||||||||| || | |||| | || || |
Sbjct 2343 CAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTAT--CTGACTACA 2286
Query 111278 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|||| |||||||||||||| || || |||| ||||| |||| || ||
Sbjct 2285 ATATTCAAAAAGAATCTACCCTTCACCTAGTACTGCGTTTGCGAGGAGG 2237
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||| || ||||| || || | || || ||||| || || | ||| |||||||
Sbjct 1779 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTGGAACCCTCA 1720
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
|| || ||| | || ||| || || |||||||| || ||||| ||||||
Sbjct 1719 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 1660
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||| | || |||| || || || || |||| ||| ||| || | || || ||
Sbjct 1659 CAACGTCTAATTTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 1600
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| |||||||||||||| | |||||||| | ||||| ||||||||
Sbjct 1599 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTCTTCGCGGTGG 1553
>seq49094
Length=1117
Score = 111 bits (122), Expect = 1e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158
||||||||||||||| || || |||| |||||||| ||||| ||||| |||| |
Sbjct 456 AATGCAAATTTTTGTAAAGACACTGACTGGCAAAACGATTACATTGGAAGTGGAAGCTTC 515
Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218
||| | | | | || || ||||||| ||||||||||| |||| ||| ||
Sbjct 516 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGTATTCCTCCCGACCA 575
Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278
||| |||||||||| ||| || ||||| | |||||| | || || | ||||||||
Sbjct 576 ACAGAGGCTTATTTTTGCAGGAAAACAGCTAGAAGATGGTCGTACGCTGTCAGATTATAA 635
Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCT 111317
||| || || ||||| || | || || ||| |||| ||
Sbjct 636 TATTCAGAAGGAATCAACTTTGCACTTGGTGCTGCGCCT 674
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158
||||||||||||||| || || |||| ||||| || || || ||||| |||| |
Sbjct 684 AATGCAAATTTTTGTAAAGACACTGACAGGCAAGACTATCACACTGGAAGTGGAAGCTTC 743
Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218
||| | ||| | || || ||||||| || ||||| ||| ||||| |||||
Sbjct 744 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 803
Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278
||||| || |||| ||| || || || | |||||| || || | || || ||
Sbjct 804 GCAAAGACTAATTTTTGCTGGAAAGCAGCTCGAAGATGGACGTACACTGTCAGACTACAA 863
Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
||| || || |||||||| | |||||||| |||||||| | |||||
Sbjct 864 TATTCAGAAGGAATCTACCTTGCATTTAGTACTGCGTCTGAGAGGTGG 911
Score = 98.7 bits (108), Expect = 8e-16
Identities = 161/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158
||||||||||||||| || || |||| ||||| || || || ||||| |||| |
Sbjct 228 AATGCAAATTTTTGTAAAGACACTGACAGGCAAGACTATCACACTGGAAGTGGAAGCTTC 287
Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218
||| | ||| | || || ||||||| || ||||| ||| ||||| |||||
Sbjct 288 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 347
Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 111276
|||||| ||||||| ||| || || || | |||||| | | ||||| | || ||
Sbjct 348 ACAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGACTAC 405
Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
||||| || || |||||||| | || ||||| | || ||| | |||||
Sbjct 406 AATATTCAGAAGGAATCTACTTTGCACTTAGTACTACGGCTGAGAGGTGG 455
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||||||||| ||||| ||||||||||||| || || ||||| |||| |
Sbjct 1 ATGCAAATTTTTGTTAAAACACTGACCGGCAAAACTATCACATTGGAAGTGGAAGCTTCT 60
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| | | | | ||||| ||| ||| ||||| |||||| |||| ||||||
Sbjct 61 GATACAATCGAGAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 120
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||||| | |||| || || || ||| |||||||| || || | || ||||||
Sbjct 121 CAAAGATTAATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACACTGTCAGACTATAAT 180
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| || || ||||| || | || || ||| | || || | |||||
Sbjct 181 ATTCAGAAGGAATCGACTTTGCACTTGGTGCTACGCCTTAGGGGTGG 227
>seq89394
Length=1369
Score = 89.7 bits (98), Expect = 4e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 104735 AACGGGTTCTACTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTCTGCAAAGTGGAA 104794
||||| ||||| || |||| |||| || ||||| ||||||||||| || ||||| |||
Sbjct 394 AACGGCTTCTATTACCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 453
Query 104795 ATAATGCGCTGGTTGGAGGGCGACGACCCGGCCGTAGATCATAAACGATGGGCGCCACAG 104854
|| ||| ||| | | ||||||||| || ||| || || |||| |||||||| ||
Sbjct 454 ATTATGAAATGGGTAGCGGGCGACGATCCCGCCAAGGACCACCAACGGTGGGCGCCCCAA 513
Query 104855 TGCCCGTTTTTGCG 104868
|| || || ||||
Sbjct 514 TGTCCCTTCCTGCG 527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420409616026288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |