Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq55316 140 3e-28 seq210326 104 2e-17 >seq55316 Length=1040 Score = 140 bits (154), Expect = 3e-28 Identities = 148/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 23764 TCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTT 23823 |||| | ||| ||||||| || ||||||| |||| ||||| || ||||||| |||| Sbjct 817 TCTTTAGGATCCCTTATATAAGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTT 758 Query 23824 TCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAA 23883 || || ||||| ||||||||||| || || || ||||||| || |||||| || | | Sbjct 757 TCCATTGCAATTTGAAACCCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAG 698 Query 23884 AATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACA 23943 || | | |||| || || ||||||||||||||| ||| |||||||| || | ||| Sbjct 697 AAACGCTCCACTAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACA 638 Query 23944 TATTTTATAAAATGT 23958 | ||| ||||||||| Sbjct 637 TGTTTGATAAAATGT 623 >seq210326 Length=301 Score = 104 bits (114), Expect = 2e-17 Identities = 119/159 (75%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 23503 AATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT 23562 ||||| || |||||| || | | ||| |||||||| ||| | |||||| || Sbjct 2 AATAATAATTCAAAATTACTAATCATACCT-CATCCCTAGAAATAAGTTCATTGCTGAAA 60 Query 23563 GTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA 23622 |||||||| ||||| |||||||||||||| | ||||||||||| |||||| || || Sbjct 61 GTTAATCCGGGCATCAATCCTCGTTTTTTCAACCAAAATATTGAAGCAAAGCTGCCTGAG 120 Query 23623 AAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGT 23661 || || || ||||||| |||||||| || | || |||| Sbjct 121 AAAAATATTTCCTCAACTGCCGCAAAAGCGATAATACGT 159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519710781933200