Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq51813 178 9e-40 seq22409 116 3e-21 seq38040 113 3e-20 seq98588 100 2e-16 seq80369 91.5 1e-13 >seq51813 Length=3444 Score = 178 bits (196), Expect = 9e-40 Identities = 749/1167 (64%), Gaps = 53/1167 (5%) Strand=Plus/Plus Query 5782 GCGTCGATTTCCCATCCAAATAGACCCCCCAGCCCCTTTTGGATGACATATTTTCCCTTG 5841 |||||||||||||| |||| ||||| || || || | | |||||||| ||||| Sbjct 186 GCGTCGATTTCCCAAGCAAAGAGACCACCTAGTTTGTTATTTCTCACATATTTACCCTTT 245 Query 5842 GCCGTCACGGACCTCTCGTCGTCGTAGGTGACGAGATCGTC-GTTG-TGGT----ACACG 5895 | | || || || | | ||| ||||| || || || | |||| |||| | || Sbjct 246 TCAATAACTGATCTGGCATTGTCATAGGTTACAAGGTCTCCAGTTGATGGTCTGAAGACA 305 Query 5896 TAGGGCGCTTGCGCCACTCCGTCGTAAT-----------TCGGGTTGGG--ATACCGGTT 5942 || || ||||| || || |||||||| | | ||| | || | || Sbjct 306 TAAGGAGCTTGGGCGACATTGTCGTAATGAAATTCCCACTTGCCTTGAGCAATTTCA-TT 364 Query 5943 CGTGATGTCTTTGTAGTCCACGACACCGTTTTCCCAGGAACCCTTTACGGGACCCGTGGC 6002 || || || |||| ||||| || |||| || ||| | ||| || || || || || || Sbjct 365 CGCAATCTCCCTGTAATCCACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGC 424 Query 6003 AGTGCCTGTGAAGGGATTGTTGT--TGGTGATGTTGTGGATTCCACGCCATCCCCTGCCG 6060 |||||||||||||| |||||| | || || || | ||| ||| || | || Sbjct 425 GTTGCCTGTGAAGGGAATGTTGTCTTCGTAATCATGA--ACGCCAGTCCAACCACGACCA 482 Query 6061 TACATGGCCACGCCCACCACCAATTTGTTTGGGTTCACGCTCTGATTGAGCAGGCGTTGG 6120 |||||||| || || | || | || || || ||||| | ||| | || || Sbjct 483 TACATGGCAACACCTAATACAATCTTCTTAGGATTCACTCCCTGTGCCAACAAATATTTT 542 Query 6121 ACGGCGAACGCGGTGGTGTACTTTTCGGTGGGGTTCCATGTGGGCGCGTACAGGGGCGTC 6180 || |||| | | ||||| |||| |||| ||||||| |||||||||| || || Sbjct 543 ACTCCGAAGTCAGATGTGTAAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTT 602 Query 6181 TGCAGTCCCAGATCGGTGTTAGACCAGGCTCCCTTGAAATCGTACGTCATGACGAAAATA 6240 || |||| ||| | || ||||||||||||||||| || || |||| | ||||||| Sbjct 603 TGATGTCCAAGAGTGTCATTTGACCAGGCTCCCTTGAAGTCATAGCTCATCAAGAAAATA 662 Query 6241 TGATCCAGATACTCCTGCACCGCACCGTATTCTACAACGTTTATTTTGTCGTAGCCCCCG 6300 ||||||| ||| | || || ||||| || ||||| | ||||| || | || | Sbjct 663 TGATCCATATAATTTTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAG 722 Query 6301 CTGATGGCGCTTGTGA--GCAGA-TACTTGCGACCCGT-GC-GAGTCTCCAGACCGTCCA 6355 || || || || | | | | ||||| | | | || ||| || | || | Sbjct 723 CTAATAGCAGAAGTCAATTCGTATTTCTTGCCATTCTTAGCTGAG-----AGCTCATCGA 777 Query 6356 GCATGGACCTGAGGTCGCCCAAGAGCGCTTGATAGGTGACGCCGTCGACTGTGACGTTTC 6415 |||| | | || || | | |||| | || || ||| | | | Sbjct 778 GCATCTCACGTAATTCTTTCATCAAACTTACATAGCAATCACCATCTTCTG---GGCTAC 834 Query 6416 CTAAGGCAGGATTGGCTCCCTTGCCTCCGGGAAATTCCCAATCTATGTCCACGCCGTCGA 6475 | | | |||| || || || ||||| || ||||| |||||||| || || || || |||| Sbjct 835 CGAGGTCAGGGTTAGCACCTTTGCCACCAGGAAACTCCCAATCGATATCTACACCATCGA 894 Query 6476 AGAACTTCCAAGTTTCCAGAAATTCTTCGACGCTCTCTACGAACACCTTTCTTTTAATCG 6535 |||| ||||| ||| ||||| || | || || || || |||| ||| Sbjct 895 AGAATTTCCATGTTAGAAGAAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATT 954 Query 6536 TGTCGTTGAGCTGGTAAAAGGGATCGCTCAGCGTCCACCCACCGATCGAGGGCAGGATGG 6595 | || | | |||| |||||| |||||||||||||| || ||||| || || Sbjct 955 TATCAACTAAAAAGAAAAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCT 1014 Query 6596 TCAGATGCGGATTG---TGTTTTCGTATGGCCATAAGCTGACCGAAATTACCCTTGTA-- 6650 ||| | ||| | |||||| || | ||| | || ||||| || || ||||| Sbjct 1015 TCAATTCCGGGCGGGCTTGTTTTAGT---GACATTAATTGGCCGAAGTTGCCTTTGTAGG 1071 Query 6651 --CATTTCCGAGTAGGCCTCGACGCCCTTCTGGGGTTTTTGTAGTGCGCCCCATATATCG 6708 |||| | || | | || || || |||||||||| ||| ||||| |||| Sbjct 1072 GCTCGTTCCATGAAGAC----AATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCG 1127 Query 6709 TGTATGGACACCTTGAAGTCGTCTCGTCCCTCGCACGATCGCTGCAGAGCTTCGAACGAG 6768 || || || || || ||||| || || || || || || ||||| |||| ||| | Sbjct 1128 TGGATTGAGACTTTAAAGTCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTG 1187 Query 6769 CCCGGCACCTGTTTCAGAGC-GTCGTTGATACCATCCCCTCCGCACATGGGCACGAATCC 6827 || | || ||| | ||| ||| || || || || || ||||| ||||| | || || Sbjct 1188 CCTTCGATCTCTTTTA-AGCTGTCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCC 1246 Query 6828 GTACAGCAGATGTGTGAGATTGGGAATGGGGATTCTGTCGGCGGGAAACTGTCTGTCGTA 6887 || |||| ||| || ||||| || || || || | || |||| |||| ||| || Sbjct 1247 ATAGAGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAACTTTCTAGGATA 1306 Query 6888 AACACCCCACTCCACGAAGTAAGCTCC 6914 |||||||| || |||||||| || || Sbjct 1307 GACACCCCATTCTACGAAGTAGGCGCC 1333 >seq22409 Length=1756 Score = 116 bits (128), Expect = 3e-21 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||| |||||||| || | | | || | || || ||||| || || |||||| Sbjct 1473 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGCTGTTTACCAGCAAAG 1532 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 |||||||| ||||| |||| || | ||||||||| || || ||| || | || Sbjct 1533 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGAATTTTCGCTTTTACATTT 1592 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 |||| || || | || ||||||||| | ||||| || || ||||| |||||||| ||| Sbjct 1593 TCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 1652 Query 44327 AAGATTTGCATGATGTGA 44344 || |||||||| ||||| Sbjct 1653 AAAATTTGCAT--TGTGA 1668 >seq38040 Length=2861 Score = 113 bits (124), Expect = 3e-20 Identities = 168/237 (71%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || |||| ||| | | || || ||||| || ||||||||||||||| Sbjct 1999 TATTTGCATACCACCTCGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTT 2058 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| || | | ||| | || |||| |||||| ||||||||||| | ||| || || Sbjct 2059 GTAGTCAGATAAGGTACGCCCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGTTGTTG 2118 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 ||||| ||| | ||| || || || ||||| ||| | || | ||||| || | Sbjct 2119 ATCTGGAGGAATACCCTCTTTATCTTGAATCTTAGCCTTTACGTTTTCAATGGTATCAGA 2178 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | |||||||| | || || |||||||| || || ||||| || || |||||||| Sbjct 2179 TGGCTCCACCTCTAGAGTTATAGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCAT 2235 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 || |||||||||||||| || | || ||| | || ||||||||||| || || || Sbjct 1589 TCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAA 1648 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGT 44265 || | ||| || ||||||| || | ||| || || || ||||| |||| || | Sbjct 1649 ATTAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTT-GGCTTTAACATT 1707 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | || ||||| | || |||||| || | || || || || || ||||| ||||| || Sbjct 1708 TTCAATAGTGTCTGAGGGTTCCACTTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTAC 1767 Query 44326 GAAGATTTGCAT 44337 ||||| ||||| Sbjct 1768 AAAGATCTGCAT 1779 >seq98588 Length=355 Score = 100 bits (110), Expect = 2e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | ||| |||| |||||| || || ||||| |||||||| || Sbjct 344 CATTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTC 285 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || |||| ||||| || |||||||| | |||||||||||| | Sbjct 284 GGAAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGG 225 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGGCGGATT 44285 || | || || || || || || |||| | | || | || || || | || || Sbjct 224 TGGGATGCCCTCTTTGTCTTGGAT-TTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTT 166 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| |||| ||||| |||||||| || ||||| || || || || ||||| Sbjct 165 CCACTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 114 >seq80369 Length=3501 Score = 91.5 bits (100), Expect = 1e-13 Identities = 165/238 (69%), Gaps = 10/238 (4%) Strand=Plus/Minus Query 44105 TTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAA 44164 ||| | ||||| | ||||| ||||| || || || || || ||||| ||||| |||||| Sbjct 425 TTCTTACCCCCACGTAGTCTTAACACAAGATGCAGTGTACTTTCCTTCTGGATATTGTAA 366 Query 44165 TCGGCGAGTTGGCGCTCG----TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 || || | ||| || || || || ||||| || |||||||| | | |||||| Sbjct 365 TC----AGATAGCGTTCTAGCATCCTCGAGTTGCTTACCAGCAAAGATAAGCCTCTGCTG 310 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGG 44279 ||||| || | || ||||| || |||||| ||||| | ||| | || || || Sbjct 309 ATCTGGTGGAATGCCCTCCTTGTCTTCTATCTT-TGCTTTTACATTCTCGATAGTATCAC 251 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || |||| || || |||||||| || | || || || ||||| ||||| Sbjct 250 TAGACTCTACTTCCAATGTTATTGTCTTTCCTGTTAATGTTTTAACAAAGATCTGCAT 193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358794232673646