Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq51813 178 9e-40
seq22409 116 3e-21
seq38040 113 3e-20
seq98588 100 2e-16
seq80369 91.5 1e-13
>seq51813
Length=3444
Score = 178 bits (196), Expect = 9e-40
Identities = 749/1167 (64%), Gaps = 53/1167 (5%)
Strand=Plus/Plus
Query 5782 GCGTCGATTTCCCATCCAAATAGACCCCCCAGCCCCTTTTGGATGACATATTTTCCCTTG 5841
|||||||||||||| |||| ||||| || || || | | |||||||| |||||
Sbjct 186 GCGTCGATTTCCCAAGCAAAGAGACCACCTAGTTTGTTATTTCTCACATATTTACCCTTT 245
Query 5842 GCCGTCACGGACCTCTCGTCGTCGTAGGTGACGAGATCGTC-GTTG-TGGT----ACACG 5895
| | || || || | | ||| ||||| || || || | |||| |||| | ||
Sbjct 246 TCAATAACTGATCTGGCATTGTCATAGGTTACAAGGTCTCCAGTTGATGGTCTGAAGACA 305
Query 5896 TAGGGCGCTTGCGCCACTCCGTCGTAAT-----------TCGGGTTGGG--ATACCGGTT 5942
|| || ||||| || || |||||||| | | ||| | || | ||
Sbjct 306 TAAGGAGCTTGGGCGACATTGTCGTAATGAAATTCCCACTTGCCTTGAGCAATTTCA-TT 364
Query 5943 CGTGATGTCTTTGTAGTCCACGACACCGTTTTCCCAGGAACCCTTTACGGGACCCGTGGC 6002
|| || || |||| ||||| || |||| || ||| | ||| || || || || || ||
Sbjct 365 CGCAATCTCCCTGTAATCCACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGC 424
Query 6003 AGTGCCTGTGAAGGGATTGTTGT--TGGTGATGTTGTGGATTCCACGCCATCCCCTGCCG 6060
|||||||||||||| |||||| | || || || | ||| ||| || | ||
Sbjct 425 GTTGCCTGTGAAGGGAATGTTGTCTTCGTAATCATGA--ACGCCAGTCCAACCACGACCA 482
Query 6061 TACATGGCCACGCCCACCACCAATTTGTTTGGGTTCACGCTCTGATTGAGCAGGCGTTGG 6120
|||||||| || || | || | || || || ||||| | ||| | || ||
Sbjct 483 TACATGGCAACACCTAATACAATCTTCTTAGGATTCACTCCCTGTGCCAACAAATATTTT 542
Query 6121 ACGGCGAACGCGGTGGTGTACTTTTCGGTGGGGTTCCATGTGGGCGCGTACAGGGGCGTC 6180
|| |||| | | ||||| |||| |||| ||||||| |||||||||| || ||
Sbjct 543 ACTCCGAAGTCAGATGTGTAAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTT 602
Query 6181 TGCAGTCCCAGATCGGTGTTAGACCAGGCTCCCTTGAAATCGTACGTCATGACGAAAATA 6240
|| |||| ||| | || ||||||||||||||||| || || |||| | |||||||
Sbjct 603 TGATGTCCAAGAGTGTCATTTGACCAGGCTCCCTTGAAGTCATAGCTCATCAAGAAAATA 662
Query 6241 TGATCCAGATACTCCTGCACCGCACCGTATTCTACAACGTTTATTTTGTCGTAGCCCCCG 6300
||||||| ||| | || || ||||| || ||||| | ||||| || | || |
Sbjct 663 TGATCCATATAATTTTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAG 722
Query 6301 CTGATGGCGCTTGTGA--GCAGA-TACTTGCGACCCGT-GC-GAGTCTCCAGACCGTCCA 6355
|| || || || | | | | ||||| | | | || ||| || | || |
Sbjct 723 CTAATAGCAGAAGTCAATTCGTATTTCTTGCCATTCTTAGCTGAG-----AGCTCATCGA 777
Query 6356 GCATGGACCTGAGGTCGCCCAAGAGCGCTTGATAGGTGACGCCGTCGACTGTGACGTTTC 6415
|||| | | || || | | |||| | || || ||| | | |
Sbjct 778 GCATCTCACGTAATTCTTTCATCAAACTTACATAGCAATCACCATCTTCTG---GGCTAC 834
Query 6416 CTAAGGCAGGATTGGCTCCCTTGCCTCCGGGAAATTCCCAATCTATGTCCACGCCGTCGA 6475
| | | |||| || || || ||||| || ||||| |||||||| || || || || ||||
Sbjct 835 CGAGGTCAGGGTTAGCACCTTTGCCACCAGGAAACTCCCAATCGATATCTACACCATCGA 894
Query 6476 AGAACTTCCAAGTTTCCAGAAATTCTTCGACGCTCTCTACGAACACCTTTCTTTTAATCG 6535
|||| ||||| ||| ||||| || | || || || || |||| |||
Sbjct 895 AGAATTTCCATGTTAGAAGAAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATT 954
Query 6536 TGTCGTTGAGCTGGTAAAAGGGATCGCTCAGCGTCCACCCACCGATCGAGGGCAGGATGG 6595
| || | | |||| |||||| |||||||||||||| || ||||| || ||
Sbjct 955 TATCAACTAAAAAGAAAAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCT 1014
Query 6596 TCAGATGCGGATTG---TGTTTTCGTATGGCCATAAGCTGACCGAAATTACCCTTGTA-- 6650
||| | ||| | |||||| || | ||| | || ||||| || || |||||
Sbjct 1015 TCAATTCCGGGCGGGCTTGTTTTAGT---GACATTAATTGGCCGAAGTTGCCTTTGTAGG 1071
Query 6651 --CATTTCCGAGTAGGCCTCGACGCCCTTCTGGGGTTTTTGTAGTGCGCCCCATATATCG 6708
|||| | || | | || || || |||||||||| ||| ||||| ||||
Sbjct 1072 GCTCGTTCCATGAAGAC----AATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCG 1127
Query 6709 TGTATGGACACCTTGAAGTCGTCTCGTCCCTCGCACGATCGCTGCAGAGCTTCGAACGAG 6768
|| || || || || ||||| || || || || || || ||||| |||| ||| |
Sbjct 1128 TGGATTGAGACTTTAAAGTCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTG 1187
Query 6769 CCCGGCACCTGTTTCAGAGC-GTCGTTGATACCATCCCCTCCGCACATGGGCACGAATCC 6827
|| | || ||| | ||| ||| || || || || || ||||| ||||| | || ||
Sbjct 1188 CCTTCGATCTCTTTTA-AGCTGTCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCC 1246
Query 6828 GTACAGCAGATGTGTGAGATTGGGAATGGGGATTCTGTCGGCGGGAAACTGTCTGTCGTA 6887
|| |||| ||| || ||||| || || || || | || |||| |||| ||| ||
Sbjct 1247 ATAGAGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAACTTTCTAGGATA 1306
Query 6888 AACACCCCACTCCACGAAGTAAGCTCC 6914
|||||||| || |||||||| || ||
Sbjct 1307 GACACCCCATTCTACGAAGTAGGCGCC 1333
>seq22409
Length=1756
Score = 116 bits (128), Expect = 3e-21
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
|||||||| |||||||| || | | | || | || || ||||| || || ||||||
Sbjct 1473 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGCTGTTTACCAGCAAAG 1532
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266
|||||||| ||||| |||| || | ||||||||| || || ||| || | ||
Sbjct 1533 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGAATTTTCGCTTTTACATTT 1592
Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326
|||| || || | || ||||||||| | ||||| || || ||||| |||||||| |||
Sbjct 1593 TCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 1652
Query 44327 AAGATTTGCATGATGTGA 44344
|| |||||||| |||||
Sbjct 1653 AAAATTTGCAT--TGTGA 1668
>seq38040
Length=2861
Score = 113 bits (124), Expect = 3e-20
Identities = 168/237 (71%), Gaps = 1/237 (0%)
Strand=Plus/Plus
Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160
||||| ||| || |||| ||| | | || || ||||| || |||||||||||||||
Sbjct 1999 TATTTGCATACCACCTCGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTT 2058
Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220
||| || | | ||| | || |||| |||||| ||||||||||| | ||| || ||
Sbjct 2059 GTAGTCAGATAAGGTACGCCCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGTTGTTG 2118
Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280
||||| ||| | ||| || || || ||||| ||| | || | ||||| || |
Sbjct 2119 ATCTGGAGGAATACCCTCTTTATCTTGAATCTTAGCCTTTACGTTTTCAATGGTATCAGA 2178
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| |||||||| | || || |||||||| || || ||||| || || ||||||||
Sbjct 2179 TGGCTCCACCTCTAGAGTTATAGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCAT 2235
Score = 87.8 bits (96), Expect = 1e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
|| |||||||||||||| || | || ||| | || ||||||||||| || || ||
Sbjct 1589 TCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAA 1648
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGT 44265
|| | ||| || ||||||| || | ||| || || || ||||| |||| || |
Sbjct 1649 ATTAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTT-GGCTTTAACATT 1707
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| | || ||||| | || |||||| || | || || || || || ||||| ||||| ||
Sbjct 1708 TTCAATAGTGTCTGAGGGTTCCACTTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTAC 1767
Query 44326 GAAGATTTGCAT 44337
||||| |||||
Sbjct 1768 AAAGATCTGCAT 1779
>seq98588
Length=355
Score = 100 bits (110), Expect = 2e-16
Identities = 163/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| || | || | ||| |||| |||||| || || ||||| |||||||| ||
Sbjct 344 CATTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTC 285
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || |||| ||||| || |||||||| | |||||||||||| |
Sbjct 284 GGAAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGG 225
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGGCGGATT 44285
|| | || || || || || || |||| | | || | || || || | || ||
Sbjct 224 TGGGATGCCCTCTTTGTCTTGGAT-TTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTT 166
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| |||| ||||| |||||||| || ||||| || || || || |||||
Sbjct 165 CCACTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 114
>seq80369
Length=3501
Score = 91.5 bits (100), Expect = 1e-13
Identities = 165/238 (69%), Gaps = 10/238 (4%)
Strand=Plus/Minus
Query 44105 TTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAA 44164
||| | ||||| | ||||| ||||| || || || || || ||||| ||||| ||||||
Sbjct 425 TTCTTACCCCCACGTAGTCTTAACACAAGATGCAGTGTACTTTCCTTCTGGATATTGTAA 366
Query 44165 TCGGCGAGTTGGCGCTCG----TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220
|| || | ||| || || || || ||||| || |||||||| | | ||||||
Sbjct 365 TC----AGATAGCGTTCTAGCATCCTCGAGTTGCTTACCAGCAAAGATAAGCCTCTGCTG 310
Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGG 44279
||||| || | || ||||| || |||||| ||||| | ||| | || || ||
Sbjct 309 ATCTGGTGGAATGCCCTCCTTGTCTTCTATCTT-TGCTTTTACATTCTCGATAGTATCAC 251
Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || |||| || || |||||||| || | || || || ||||| |||||
Sbjct 250 TAGACTCTACTTCCAATGTTATTGTCTTTCCTGTTAATGTTTTAACAAAGATCTGCAT 193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 358794232673646
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |