Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq49094 100 3e-16 seq22409 86.0 6e-12 seq38040 84.2 2e-11 >seq49094 Length=1117 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 |||||||| ||||||||||| || || |||||| | || || || ||||| || ||||| Sbjct 1103 TCCTTCTGGATGTTATAGTCAGACAGTGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAA 1044 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 |||| | |||||||| | || | || ||||||| | ||| | ||||| | ||| Sbjct 1043 ATCAATCTTTGTTGGTCTGGAGGGATGCCTTCCTTGT-CTTGAATCTTTGCCTTAACATT 985 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | ||||| | |||||||| | || || |||||||| ||||| || || || Sbjct 984 TTCGATTGTGTCAGAAGCTTCCACCTCTAAAGTAATAGTTTTACCAGTCAGTGTTTTAAC 925 Query 41851 GAAAATCTGCAT 41862 |||||| ||||| Sbjct 924 GAAAATTTGCAT 913 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || |||| ||||| |||| || ||||||||||| |||||||| || || ||||| Sbjct 218 AGGCGTAGCACCAAGTGCAAAGTCGATTCCTTCTGAATATTATAGTCTGACAGTGTGCGT 159 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || || ||||| |||||||| || | | ||||| || | |||| || ||| Sbjct 158 CCATCTTCCAGTTGCTTTCCGGCGAAAATTAATCTTTGTTGATCTGGAGGAATGCCTTCC 99 Query 41765 TTGTCCATGATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||| | ||| | ||||| | ||| | | || || | ||||| |||| || Sbjct 98 TTGT-CTTGAATCTTTGCCTTTACGTTCTCGATTGTATCAGAAGCTTCCACTTCCAATGT 40 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| || ||||| || || || ||||| ||||| Sbjct 39 GATAGTTTTGCCGGTCAGTGTTTTAACAAAAATTTGCAT 1 >seq22409 Length=1756 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| ||||||| ||| ||||| |||||||| ||||| || | || || | || || Sbjct 1454 CACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTC 1513 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||| || || || || |||| || || ||||| | |||| | ||||| || | Sbjct 1514 TAGCTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCT-T 1572 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || |||| |||| || | | ||| || | |||||||| | || || |||| Sbjct 1573 GAATTTTCGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTTT 1632 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || ||||| |||||||| ||||| Sbjct 1633 TACCCGTAAGGGTCTTGACGAAAATTTGCAT 1663 >seq38040 Length=2861 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||||| || ||||| || || |||||| || ||||| ||||| || Sbjct 2009 CCACCTCGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAT 2068 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| ||| | || || | |||||||||||| || || || || ||||| || | ||| Sbjct 2069 AAGGTACGCCCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGAGGA 2128 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||| || | | ||| | || || | ||| | | || || | |||||| Sbjct 2129 ATACCCTCTTTAT-CTTGAATCTTAGCCTTTACGTTTTCAATGGTATCAGATGGCTCCAC 2187 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||||| || || || || || ||||| || || || ||||| Sbjct 2188 CTCTAGAGTTATAGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCAT 2235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 460728479525600