Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq7268 91.5 1e-13 >seq7268 Length=409911 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| | || || |||| || ||||| ||||| ||| || || | Sbjct 285076 ATGCAAATTTTCGTTAAGACTCTGACTGGTAAAACTATTACATTGGAAGTAGAGGCCTCT 285135 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| ||||||| ||||||||||| | ||| || || Sbjct 285136 GACACAATTGAGAATGTGAAGGCAAAAATTCAGGATAAAGAAGGGATCCCCCCGGAACAG 285195 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || ||| | |||||||| || || || || |||||| | | || | ||||||||||| Sbjct 285196 CAGAGATTGATCTTTGCCGGGAAGCAGCTTGAAGATGGCCACACGCTCTCCGATTACAAT 285255 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 ||||| |||||||| ||||| || Sbjct 285256 ATTCAAAAGGAATCCACTCTCCA 285278 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 28957 TAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAAC 29016 |||| ||||| || ||| | || |||||||| || ||||| || ||| || ||| Sbjct 282107 TAAATATGCAGATCTTCGTTAAGACATTGACTGGAAAAACAATAACCTTAGAGGTTGAAG 282166 Query 29017 CCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAG 29076 | |||| || | | || ||||| ||||||| || ||||||||| | || || Sbjct 282167 CATCAGACACAATTGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGTATTCCACCAG 282226 Query 29077 ATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATT--CCAAAACTATGGCCGA 29134 |||| || || | ||||| || || ||||| || |||||| | | ||| | | || Sbjct 282227 ATCAGCAGAGGTTGATCTTCGCCGGAAAACAGCTTGAAGATGGACGCACACTTT--CTGA 282284 Query 29135 TTACAATATTCAGAAGGAATCTACTCTTCA 29164 ||||||||||| ||||| ||||| || || Sbjct 282285 CTACAATATTCAAAAGGAGTCTACACTGCA 282314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428270228873345