Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq7268 91.5 1e-13 seq4730 82.4 6e-11 >seq7268 Length=409911 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | || || |||| || ||||| ||||| ||| || || | Sbjct 285076 ATGCAAATTTTCGTTAAGACTCTGACTGGTAAAACTATTACATTGGAAGTAGAGGCCTCT 285135 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| ||||||| ||||||||||| | ||| || || Sbjct 285136 GACACAATTGAGAATGTGAAGGCAAAAATTCAGGATAAAGAAGGGATCCCCCCGGAACAG 285195 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || ||| | |||||||| || || || | |||||| | | || | ||||||||||| Sbjct 285196 CAGAGATTGATCTTTGCCGGGAAGCAGCTTGAAGATGGCCACACGCTCTCCGATTACAAT 285255 Query 25215 ATTCAAAAGGAATCTACTCTTCA 25237 |||||||||||||| ||||| || Sbjct 285256 ATTCAAAAGGAATCCACTCTCCA 285278 >seq4730 Length=3448589 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 |||||| || || ||||||| |||| || || ||||| ||| || ||| | | Sbjct 2520113 AATGCAGATCTTTGTCAAAACTCTGACAGGAAAGACCATCACCCTGGAGGTTGAAGCTTC 2520054 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 ||| ||| | | || | ||| || ||| ||||| ||||| | || |||||| Sbjct 2520053 AGATACGATAGAGAATGTAAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCA 2519994 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||| | | |||||||| || |||||||| ||||| | ||| | | || ||||| Sbjct 2519993 GCAACGTTTGATCTTTGCTGGTAAACAATTAGAAGACGGAAGAACCCTTTCTGACTACAA 2519934 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||||||||| || || ||| |||| || || |||| || || Sbjct 2519933 CATCCAAAAGGAATCCACCCTCCACTTGGTCTTGCGTCTACGCGGGGG 2519886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410733722022986