Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq4107 113 8e-20 seq6565 102 2e-16 >seq4107 Length=822756 Score = 113 bits (124), Expect = 8e-20 Identities = 167/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 189395 AGAAAGTATATATATTCCATTAAACAACTCGAAAAAGCGGAAACTCATGATCCTCTATGG 189454 ||||| ||||| ||||| | | || | ||||| | || || |||||| | ||||| Sbjct 362001 AGAAAATATATTTATTCTTTGCACGAATTGGAAAACTCTGAGACCCATGATGATTTATGG 362060 Query 189455 AACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTAT 189514 || || | |||| || ||||| | | ||||||||||||| | ||||| ||||||| Sbjct 362061 AATGCTTGTCAAAATCAAATGGTAACAATAGGAAAAATGCATGGATTTTTGAGAATGTAC 362120 Query 189515 TGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGC-TTTGAGTTATAGTAT 189573 ||||| ||||| ||| | |||||||| | |||||| ||||| || || || | || Sbjct 362121 TGGGCAAAGAAAATATTAGAATGGACCAAAACACCCGAAGATGCGTTAGAATGGGCCAAT 362180 Query 189574 CTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGG 189627 ||||| || || || ||| |||| ||| |||||||| || || ||||| Sbjct 362181 -TATTTAAATAATAAATACAGTATAGATGGCTGTGATCCTAATGGCTATGTAGG 362233 >seq6565 Length=407321 Score = 102 bits (112), Expect = 2e-16 Identities = 159/225 (71%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 135610 GAGTGGACTACGTGGaaaaaaaTACCCGATCCTGTTTTGCATATAGAACTTAGG-AGATG 135668 || ||| || | ||| || | | | |||||| || |||||||| || ||||| | ||| Sbjct 135205 GAATGGGCTGCCTGGCAAGATAGAGGCGATCCGGTGTTGCATATCGA-CTTAGTTAAATG 135147 Query 135669 GGCGGATGTTTTTATTATAGCGCCCTTAACGGCAAATACGTTAGCAAAAATAGCTAATGG 135728 ||| ||| | || | || || || ||| || || || | | || ||||||| ||| Sbjct 135146 GGCTGATTTATTCTTAATCGCTCCATTAGATGCTAACACACTTGGCAAGATAGCTAGTGG 135087 Query 135729 TATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATACAAACAAACCACTCAT 135788 |||||| |||||| | |||| | | | | | |||||| || | || || ||| | | Sbjct 135086 TATATGTGATAATATCTTGACCTGCGTCGCACGTGCCTGGAATCCTAAAAAGCCATTGGT 135027 Query 135789 TTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTAC 135833 || |||||||| |||||||| ||||||||||||||| |||| Sbjct 135026 GTTTTGTCCTGCTATGAATACAAAGATGTGGGAACATCCTGTTAC 134982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923051408043960