Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq4970 82.4 7e-11 >seq4970 Length=98340 Score = 82.4 bits (90), Expect = 7e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 16505 ATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGA 16564 ||||| ||||| || | ||| |||||||||||| || | ||| ||||| || | ||| Sbjct 66054 ATATATGTATCGATCAACAAAGAATACATTTCTGAGTGGACATTTTCCATAGCAACCTGG 66113 Query 16565 AAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTC-AGAGTAAAACCTTTCTGCTAA 16623 |||||||||||||| | || || | | ||| || || || | ||||||||| | | Sbjct 66114 AAACCATAAAAGCAGCGTGCCTCTGTAACTTGGACCTCTTGACT-GAACCTTTCTACAAG 66172 Query 16624 GTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGC 16662 || ||||| || |||||||| ||| || || || || Sbjct 66173 ATTCTCGTTGACAATTCCATCAGAAGCAGCGAAGAATGC 66211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462439160141400