Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq7268 114 1e-20 seq4730 107 2e-18 seq4970 87.8 2e-12 >seq7268 Length=409911 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | |||||| || | ||| | |||||||| |||||||| || || || Sbjct 282567 GCCACCACGAAGACGCAATACAAGGTGCAATGTAGACTCCTTTTGAATATTGTAGTCAGA 282508 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||||| ||||||||||||||||| ||| |||||| | |||||||| || || Sbjct 282507 AAGTGTGCGGCCATCTTCGAGCTGTTTACCGGCAAAGATCAACCTCTGCTGATCTGGTGG 282448 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||||||||| ||| |||| | || | | || | |||||||| || ||| | Sbjct 282447 AATACCTTCTTTGTC-TTGAATTTTCGCCTTCACGTTCTCAATTGTGTCGGAGGCCTCGA 282389 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| | || | || || || || | || || ||||| ||||||||| Sbjct 282388 CCTCCAGAGTTATTGTTTTTCCAGTAAGGGTCTTGACGAAAATTTGCATA 282339 Score = 104 bits (114), Expect = 2e-17 Identities = 146/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626 |||||||| |||||||| || || || | ||||| || | ||||| |||||||| || Sbjct 282308 GTAGACTCCTTTTGAATATTGTAGTCAGAAAGTGTGCGTCCA-TCTTCAAGCTGTTTTCC 282250 Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTT 139686 || |||||| | |||||||| || || || ||||||||||| ||| |||||| | Sbjct 282249 GGCGAAGATCAACCTCTGCTGATCTGGTGGAATACCTTCTTTGTC-TTGAATTTTTGCCT 282191 Query 139687 TAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACG 139745 || | | ||| | |||||| | | || ||||| | ||| | || || || ||||| | Sbjct 282190 TAACATTTTCAATTGTGTCTGATGCTTCAACCTCTAAGGTTATTGTTTTTCCAGTCAATG 282131 Query 139746 TTTTTACGAATATTTGCATA 139765 | || ||||| || |||||| Sbjct 282130 TCTTAACGAAGATCTGCATA 282111 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | |||||| || | ||| | || ||||| |||||||| || || || Sbjct 283251 GCCTCCACGAAGACGCAATACAAGGTGCAATGTTGACTCCTTTTGAATATTGTAGTCAGA 283192 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||||| |||||||||||||| || || |||||| | |||||||| || || Sbjct 283191 AAGTGTGCGGCCATCTTCGAGCTGTTTGCCCGCGAAGATCAACCTCTGCTGATCTGGTGG 283132 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||||||||| ||| |||||| ||| | | ||| | |||||| | | || | Sbjct 283131 AATACCTTCTTTGTC-TTGAATTTTTGCCTTAACATTTTCAATTGTGTCTGACGCTTCAA 283073 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| | || | || || || || | || || ||||| |||||||| Sbjct 283072 CCTCCAGAGTTATTGTTTTTCCTGTAAGGGTCTTAACGAAAATTTGCAT 283024 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | |||||| || | ||| | |||||||| |||||||| || || || Sbjct 284163 GCCACCACGAAGACGCAATACAAGGTGCAATGTAGACTCCTTTTGAATATTGTAGTCAGA 284104 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||||| ||||| ||||||||||| ||| |||| | | |||||| ||||| Sbjct 284103 AAGTGTGCGGCCATCTTCAAGCTGTTTACCGGCAAAGATTAATCTTTGCTGCATTGGAGG 284044 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || |||||||| || |||||| || | | || | |||||||| || ||| || Sbjct 284043 AATACCTTCTTTATCTTCGATTTTCGCCTTCACGTTCTCAATTGTGTCGGAGGCCTCGAC 283984 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | || | || || || || | || || ||||| ||||||||| Sbjct 283983 CTCCAGAGTTATTGTTTTTCCTGTAAGGGTCTTGACGAAAATTTGCATA 283935 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| ||||| | ||| | || | || | || || || |||||||| || || || Sbjct 284847 GCCACCTCGAAGACGGAGTACAAGATGGAGAGTGGATTCCTTTTGAATATTGTAGTCTGA 284788 Query 139597 CATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | |||| || | ||||| ||||||||||| ||| |||||| | |||||||| || | Sbjct 284787 AAGCGTGCGTCCA-TCTTCAAGCTGTTTACCGGCAAAGATCAACCTCTGCTGATCTGGTG 284729 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 | || ||||||||||| ||| |||| | || | | || | |||||||| || ||| Sbjct 284728 GAATACCTTCTTTGTC-TTGAATTTTCGCCTTCACGTTCTCAATTGTGTCGGAGGCCTCG 284670 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| | || | || || || || | || || ||||| ||||||||| Sbjct 284669 ACCTCCAGAGTTATTGTTTTTCCTGTAAGGGTCTTGACGAAAATTTGCATA 284619 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 |||||||| || ||||| ||||| || | ||||| ||||| |||||||||||| Sbjct 284360 GTAGACTCCTTCTGAATATTATAGTCAGAAAGTGTGCGGCCATCTTCAAGCTGTTTACCA 284301 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686 || |||||| | ||||| || || || || ||||||||||| ||| |||| | ||| Sbjct 284300 GCGAAGATCAACCTCTGCTGGTCCGGGGGAATACCTTCTTTGTC-TTGAATTTTAGCTTT 284242 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | ||| | || |||| | ||| || || | || | || || || || | || Sbjct 284241 GACATTTTCAATAGTATCGGATGCCTCAACTTCCAGCGTTATTGTTTTACCTGTAAGAGT 284182 Query 139747 TTTTACGAATATTTGCAT 139764 || ||||| |||||||| Sbjct 284181 CTTAACGAAAATTTGCAT 284164 Score = 82.4 bits (90), Expect = 8e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || |||| |||||| || | ||| | |||||||| |||||||| || || || Sbjct 283479 GCCTCCACGTAGACGCAATACAAGGTGCAATGTAGACTCCTTTTGAATATTGTAGTCAGA 283420 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||| | |||||||||||||| || || |||||| | || || || || || Sbjct 283419 AAGTGTACGGCCATCTTCGAGCTGTTTGCCTGCGAAGATCAACCTCTGTTGGTCTGGGGG 283360 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||||||||| ||| |||| | ||| | | ||| | || |||| | ||| | Sbjct 283359 AATACCTTCTTTGTC-TTGAATTTTAGCTTTGACATTTTCTATAGTATCGGATGCCTCAA 283301 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | || | || | || || || || | || || || || |||||||| Sbjct 283300 CTTCCAGCGTTATTGTTTTACCTGTAAGGGTCTTAACAAAAATTTGCAT 283252 Score = 82.4 bits (90), Expect = 8e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| || || ||||||||||| || || || | ||||| ||||| ||||| Sbjct 283910 TGAAGAGTGGATTCTTTTTGAATATTGTAGTCAGAAAGTGTGCGGCCATCTTCAAGCTGC 283851 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 ||||| || |||||| | ||||| || ||||| || || |||||||| ||| |||| Sbjct 283850 TTACCGGCGAAGATCAACCTCTGCTGGTCTGGAGGAATACCCTCTTTGTC-TTGAATTTT 283792 Query 139682 TG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | |||| | || | |||||||| || ||| || || | || | || || || || Sbjct 283791 CGCCTTTACATTCTCAATTGTGTCGGAGGCCTCAACTTCCAATGTAATAGTTTTTCCAGT 283732 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 | ||||| || || |||||||| Sbjct 283731 GAGGGTTTTAACAAAAATTTGCAT 283708 >seq4730 Length=3448589 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | |||||| || ||||||| || ||||| || || || ||||| ||| Sbjct 2520114 CCTCCGCGAAGACGCAAGACCAAGTGAAGAGTGGACTCCTTCTGTATATTATAGTCGGAA 2520173 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| || |||||| | |||||||||||| |||||| ||| |||||||| ||||| Sbjct 2520174 AGTGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAGATCAAACGCTGCTGATCTGGAGGA 2520233 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| | || | ||| | | || | || || | | || || Sbjct 2520234 ATTCCTTCCTTATC-TTGAATCTTGGCTTTCACGTTCTCTATCGTATCTGAAGCTTCAAC 2520292 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | ||||| || || | ||||| ||||| |||||||| Sbjct 2520293 CTCCAGGGTGATGGTCTTTCCTGTGAGTGTTTTCACGAAGATTTGCAT 2520340 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | |||||| || ||||||| || ||||| || || |||||||| ||| Sbjct 2520570 CCTCCGCGAAGACGCAAGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTATAGTCGGAA 2520629 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | |||||||||||| |||||| ||| |||||||| ||||| Sbjct 2520630 AGAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATCAAACGCTGCTGATCTGGAGGA 2520689 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| | || | ||||| | || | || || | | || || Sbjct 2520690 ATTCCTTCCTTATC-TTGAATCTTGGCTTTTACGTTCTCTATCGTATCTGAAGCTTCAAC 2520748 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | ||||| || || | ||||| ||||| |||||||| Sbjct 2520749 CTCCAAGGTGATGGTCTTTCCTGTGAGTGTTTTCACGAAGATTTGCAT 2520796 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || |||| |||||| || ||||| | || || || ||||| ||||| || || Sbjct 2519886 CCCCCGCGTAGACGCAAGACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAA 2519945 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || |||||| | |||||||||||| |||||| |||||||||||| ||||| Sbjct 2519946 AGGGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAGATCAAACGTTGCTGATCTGGAGGA 2520005 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| | || | |||| | || | || || | | || || Sbjct 2520006 ATTCCTTCCTTATC-TTGAATCTTGGCCTTTACATTCTCTATCGTATCTGAAGCTTCAAC 2520064 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | ||||| || |||| ||||| || || || ||||| Sbjct 2520065 CTCCAGGGTGATGGTCTTTCCTGTCAGAGTTTTGACAAAGATCTGCAT 2520112 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||||||| ||||| | || || || || || ||||| || || | Sbjct 2521254 CCTCCGCGAAGACGCAAAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTC--TG 2521311 Query 139598 ATTGTGCTCGA--GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 || | | ||| |||||| | ||||||||||||| |||| | |||||| || ||||||| Sbjct 2521312 ATAGAGTTCGTCCGTCTTCTAACTGTTTACCAGCAAAGATTAAACGTTGTTGTTCGGGAG 2521371 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 |||| ||||| || || || || ||| | | ||| | ||||| | | ||| | Sbjct 2521372 GTATTCCTTCCTTATCTTGTATCTTAGCTTTCACGTTTTCTATCGTGTCCGAAGCCTCAA 2521431 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || | ||| | || || || || | |||||||| || || |||||| Sbjct 2521432 CTTCCAGGGTGATGGTTTTACCCGTGAGTGTTTTTACAAAGATCTGCATA 2521481 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 ||||| || || || | |||||||| || || || ||||| ||| | || || Sbjct 2520354 CGCAAGACCAAATGCAGAGTAGACTCCTTCTGTATATTATAGTCGGAAAGGGTTCTACCA 2520413 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| | ||||||||||||| |||||| || |||||||||||||| || ||||| || Sbjct 2520414 TCTTCCAACTGTTTACCAGCAAAGATCAATCGCTGCTGATCGGGAGGAATACCTTCCTTA 2520473 Query 139670 TCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 || ||| | || | ||| | | || | || || | | || || || | ||| | Sbjct 2520474 TC-TTGAATCTTGGCTTTCACGTTCTCTATCGTATCTGAAGCTTCAACTTCCAGGGTGAT 2520532 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| || || | |||||| || || || ||||| Sbjct 2520533 GGTCTTTCCTGTAAGCGTTTTGACAAAGATCTGCAT 2520568 >seq4970 Length=98340 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/115 (78%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 52834 AAAGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTG 52893 ||||| || ||| |||||| |||| || || || || || || ||||| | || | Sbjct 65582 AAAGATGCTGTCACGATTGAACAAGAATTCTTAACAGATGCGTTGCCCGTTGAAATGATA 65523 Query 52894 GGCATGAAC-GCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTG 52947 ||||||||| |||| | | ||||| ||||||||||||||||||||||||||||| Sbjct 65522 GGCATGAACTGCGAGC-TCATGTGTCAGTACATCGAGTTTGTTGCGGACAGACTG 65469 Score = 82.4 bits (90), Expect = 8e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 52521 AGACTTGATACTCAACGCTTTTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGC 52580 || ||| || | ||||| | || ||| | ||||| || || || | | | ||||| Sbjct 65972 AGCCTTTTTATTTAACGCAATCGAAAATCTGCCGTGCGTTGCTAAGAAAGCTAACTGGGC 65913 Query 52581 ATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTAT 52640 |||||| ||||| | |||| |||||||| ||||||| | ||||| |||||| Sbjct 65912 ATTGAATTGGATAAACCACGAGTCTGCCACTTTCCCCGAACGAATAGTCGCATTTGCTGC 65853 Query 52641 AGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTTTACATCAAAACCTTGGG 52700 |||||||| | ||||| |||||||| || || || |||| | || | || Sbjct 65852 GGTGGAAGGCATATTTTTCAGCGGTAGTTTCGCCGCTATCTTTTGGTTGAAGAAAAGAGG 65793 Query 52701 CATAATGCCCGGCCTCACGTTTAGCAACGA 52730 | ||||| ||||| || ||||||||||| Sbjct 65792 TCTCATGCCTGGCCTTACATTTAGCAACGA 65763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495985876120800