Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq4970 86.0 6e-12 >seq4970 Length=98340 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/191 (72%), Gaps = 7/191 (4%) Strand=Plus/Plus Query 13903 AAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTT 13960 |||| | |||| ||||||| | ||||| || ||||||| || | || |||||||| Sbjct 66028 AAATTTACCTT-TCTTTAGCGTCCTTGATAT--ATGTATCGATCAACAAAGAATACATTT 66084 Query 13961 CAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATT 14020 | ||||| | ||||| ||||| | ||| ||||||||||| || | || |||| || Sbjct 66085 CTGAGTGGACATTTTCCATAGCAACCTGGAAACCATAAAAGCAGCGTGCCTCTGTAACTT 66144 Query 14021 GTACCTC-CGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCA 14079 | ||||| || | || |||||| | | || || || ||||| |||||| ||| || Sbjct 66145 GGACCTCTTGACT-GAACCTTTCTACAAGATTCTCGTTGACAATTCCATCAGAAGCAGCG 66203 Query 14080 AAAAATGCCAA 14090 || ||||| || Sbjct 66204 AAGAATGCTAA 66214 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 13368 TTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATT 13427 ||| |||||||| | ||| | || || ||||| || |||||||| |||| || |||| Sbjct 65209 TTTCTGATATTCTCCAACCTTCTTCTCGAAAAAATTCGTTTTACCCTCCAAGGAAATATG 65268 Query 13428 TTCCATAAAATCGAATGGATTTGTTGACATA 13458 ||||||||| || ||||||||||| |||||| Sbjct 65269 TTCCATAAAGTCAAATGGATTTGTGGACATA 65299 Score = 82.4 bits (90), Expect = 7e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 ||||||||||| ||| |||||||| |||||| | || ||||| | |||| ||| | Sbjct 65743 CCTCATCTCTAGAAATGAGTTCGTTGCTAAATGTAAGGCCAGGCATGAGACCTCTTTTCT 65802 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | |||||||| || || ||||| ||| || ||||| || || || |||||||| | Sbjct 65803 TCAACCAAAAGATAGCGGCGAAACTACCGCTGAAAAATATGCCTTCCACCGCAGCAAATG 65862 Query 13802 CTATTAGTCGTTC 13814 | | || |||||| Sbjct 65863 CGACTATTCGTTC 65875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478513428246360