Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq4730 95.1 1e-14 >seq4730 Length=3448589 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 ||||||| || | | ||| |||||||| || ||||| || || ||||| || || ||| Sbjct 2520796 TTCCTCCGCGAAGTCGCAAGACCAAATGCAGAGTAGACTCCTTCTGTATATTATAGTCGG 2520855 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | |||| || |||||| |||||||| || ||| | || | | ||| ||||| | Sbjct 2520856 AAAGAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATCAAACGCTGCTGATCTGGTG 2520915 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||| || || ||| || |||||| | | | | ||| || ||| Sbjct 2520916 GAATTCCTTCCTTATCTTGAATCTTGGCTTTCACGTTCTCTATCGTATCTGAAGCTTCAA 2520975 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| ||| ||||| || || |||| ||||||||||| || |||||| Sbjct 2520976 CTTCCAGGGTGATGGTCTTCCCTGTCAGAGTTTTGACAAAGATCTGCATT 2521025 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||| || || | | ||| |||||||| || ||||| || || ||||| || || ||| Sbjct 2520340 TTCCACCGCGAAGTCGCAAGACCAAATGCAGAGTAGACTCCTTCTGTATATTATAGTCGG 2520399 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | ||| || ||||||||| ||||| || ||| | || | | ||| |||||| | Sbjct 2520400 AAAGGGTTCTACCATCTTCCAACTGTTTACCAGCAAAGATCAATCGCTGCTGATCGGGAG 2520459 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||| || || ||| || |||||| | | | | ||| || ||| Sbjct 2520460 GAATACCTTCCTTATCTTGAATCTTGGCTTTCACGTTCTCTATCGTATCTGAAGCTTCAA 2520519 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| ||| ||||| || || || | |||||||||||| || |||||| Sbjct 2520520 CTTCCAGGGTGATGGTCTTTCCTGTAAGCGTTTTGACAAAGATCTGCATT 2520569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419522772254319