Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq4970 91.5 1e-13 >seq4970 Length=98340 Score = 91.5 bits (100), Expect = 1e-13 Identities = 117/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 13421 ATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGG 13480 ||||| ||||| ||||| || |||||||||||| || | ||||||||| || | ||| Sbjct 66054 ATATATGTATCGATCAACAAAGAATACATTTCTGAGTGGACATTTTCCATAGCAACCTGG 66113 Query 13481 AAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC-GGAGTAAAATCTTTCTGCTAA 13539 ||||||||||| || | ||||||| || || || || || | || |||||| | | Sbjct 66114 AAACCATAAAAGCAGCGTGCCTCTGTAACTTGGACCTCTTGACT-GAACCTTTCTACAAG 66172 Query 13540 GTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGC 13578 || ||||| || || || ||| |||||| || || || Sbjct 66173 ATTCTCGTTGACAATTCCATCAGAAGCAGCGAAGAATGC 66211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430916222517798