Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq7268 87.8 2e-12 >seq7268 Length=409911 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCT 48581 |||||| ||| || |||||||| ||||| |||| || ||| || | || || |||| Sbjct 283911 ATGAAGAGTGGATTCTTTTTGAATATTGTAGTCAGA-AAGTGTGCGGCCATCTTCAAGCT 283853 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||||||| || | || || | |||||| || || | || || ||||| ||||| Sbjct 283852 GCTTACCGGCGAAGATCAACCTCTGCTGGTCTGGAGGAATACCCTCTTTGTCTTGAATTT 283793 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 || ||| | | | | || || |||| | ||| || | ||| || ||||| || | Sbjct 283792 TCGCCTTTACATTCTCAATTGTGTCGGAGGCCTCAACTTCCAATGTAATAGTTTTTCCAG 283733 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 |||| ||||| |||||||| ||||| Sbjct 283732 TGAGGGTTTTAACAAAAATTTGCAT 283708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421186516746599