Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq4730 104 2e-17 seq7268 98.7 1e-15 >seq4730 Length=3448589 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| ||||| | || ||||| | |||||| | ||| | ||| | Sbjct 2520569 AATGCAGATCTTTGTCAAAACGCTTACAGGAAAGACCATCACCCTGGAAGTTGAAGCTTC 2520510 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || || ||| | || ||| |||||| || || ||||| || ||||||||||| Sbjct 2520509 AGATACGATAGAGAACGTGAAAGCCAAGATTCAAGATAAGGAAGGTATTCCTCCCGATCA 2520450 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || || | || | | || ||||| | ||||||| ||||| | | ||||||||| Sbjct 2520449 GCAGCGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGTAGAACCCTTTCCGACTATAA 2520390 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || || || || |||||| | ||| ||||| || ||||| | || |||| Sbjct 2520389 TATACAGAAGGAGTCTACTCTGCATTTGGTCTTGCGACTTCGCGGTGGAA 2520340 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || || |||||| | |||||||| | |||||| | ||| | ||| | Sbjct 2521253 AATGCAGATCTTCGTGAAAACACTCACTGGAAAGACCATCACCCTGGAAGTTGAAGCTTC 2521194 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || || ||| | || ||| |||||| || || ||||| || ||||| ||||| Sbjct 2521193 AGATACGATAGAGAATGTAAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCA 2521134 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | | || | || || ||||| | ||||||| ||||| | ||||||||| Sbjct 2521133 GCAGCGTTTGATCTTCGCTGGAAAACAGTTGGAAGATGGTAGAACACTTTCCGACTATAA 2521074 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| || || || || ||| | || |||||||| | ||| | ||||||| Sbjct 2521073 CATCCAGAAGGAGTCCACTCTTCACTTGGTCCTGCGTCTTCGCGGAGGAA 2521024 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | || || |||||| | || ||||| | |||||| | || | ||| | Sbjct 2520797 AATGCAAATCTTCGTGAAAACACTCACAGGAAAGACCATCACCTTGGAGGTTGAAGCTTC 2520738 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || || ||| | || ||| |||||| || || ||||| || ||||| ||||| Sbjct 2520737 AGATACGATAGAGAACGTAAAAGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCA 2520678 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | | || | | || |||||| | ||||||| ||||| | ||||||||| Sbjct 2520677 GCAGCGTTTGATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTCTTTCCGACTATAA 2520618 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| || || || || ||| | || ||||| || | ||| | ||||||| Sbjct 2520617 CATCCAGAAGGAGTCCACTCTTCACTTGGTCTTGCGTCTTCGCGGAGGAA 2520568 >seq7268 Length=409911 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | || || ||| | || || | ||| | || || | Sbjct 282568 ATGCAAATTTTTGTTAAGACCCTTACAGGTAAAACAATAACGCTGGAAGTTGAGGCATCC 282627 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | |||||| || ||| ||||||||||| || || || || || Sbjct 282628 GATACTATTGAAAATGTCAAAGCTAAAATTCAAGACAAAGAAGGTATTCCCCCGGACCAG 282687 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | || | || || ||||| || ||||||| | | | |||||||| Sbjct 282688 CAGAGGTTGATCTTCGCTGGTAAACAGCTTGAAGATGGCCGCACACTTTCTGACTATAAT 282747 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| ||||| ||| ||||||| || ||||||||| ||||||| Sbjct 282748 ATTCAAAAGGAATCCACTCTCCATCTTGTACTGAGACTTCGAGGAGG 282794 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | |||||||| || | || || ||| | || || | ||| | ||| | | Sbjct 286672 ATGCAAATTTTTGTAAAGACCCTCACGGGGAAAACAATAACGCTGGAAGTTGAAGCCTCC 286731 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || ||| | ||||| || ||| ||||||||||| || || || ||||| Sbjct 286732 GATACTATTGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAG 286791 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||| | || | || ||| ||||| |||||||||| | | | ||||| || Sbjct 286792 CAGAGATTGATCTTCGCCGGTAAACAGCTCGAAGATGGCCGCACACTTTCTGACTACAAT 286851 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||||||||| || ||||||| || || |||| | ||||| Sbjct 286852 ATTCAAAAAGAATCCACCCTCCATCTTGTATTGCGACTCCGTGGAGG 286898 Score = 82.4 bits (90), Expect = 7e-11 Identities = 181/267 (68%), Gaps = 7/267 (3%) Strand=Plus/Plus Query 26718 TAATGATACTAT-TTCTCGCTAAATTAT--ATAAGTACT-TTTTAGTCAAACAAAATGCA 26773 |||||||| ||| |||| | || || |||| | || |||||| ||| | |||| Sbjct 282060 TAATGATAATATGTTCTTGTTATGACATTCATAATTTCTATTTTAGATAAATA---TGCA 282116 Query 26774 AGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACAC 26833 | || || || ||||| ||||||||| | || ||| | || | ||| || ||||| Sbjct 282117 GATCTTCGTTAAGACATTGACTGGAAAAACAATAACCTTAGAGGTTGAAGCATCAGACAC 282176 Query 26834 CATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAG 26893 || || | || || ||| ||| ||||||||||| || || || ||||| || || Sbjct 282177 AATTGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAGCAGAG 282236 Query 26894 ACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCA 26953 | || | || ||| ||||| || ||||||| | | | ||||| || ||||| Sbjct 282237 GTTGATCTTCGCCGGAAAACAGCTTGAAGATGGACGCACACTTTCTGACTACAATATTCA 282296 Query 26954 AAAAGAATCTACTATCCATCTGGTCCT 26980 ||| || ||||| | ||||| || || Sbjct 282297 AAAGGAGTCTACACTGCATCTTGTACT 282323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478587016655280