Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq4730 98.7 8e-16 seq7268 93.3 4e-14 >seq4730 Length=3448589 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || |||||||||||||| || ||||| ||||| ||| | ||| || | Sbjct 2520569 AATGCAGATCTTTGTCAAAACGCTTACAGGAAAGACCATCACCCTGGAAGTTGAAGCTTC 2520510 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 || || | | || || || ||| || ||| ||||| ||||| | || |||| Sbjct 2520509 AGATAC-GATAGAGAACGTGAAAGCCAAGATTCAAGATAAGGAAGGTATTCCTCCCGATC 2520451 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| || | || | ||| || ||||| || ||||||| | |||| | |||| |||| Sbjct 2520450 AGCAGCGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGTAGAACCCTTTCCGACTATA 2520391 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 | || || || ||||||||| | ||| |||| ||| || | || || |||| Sbjct 2520390 ATATACAGAAGGAGTCTACTCTGCATTTGGTCTTGCGACTTCGCGGTGGAA 2520340 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || ||||||||||| || || || || ||||| ||| | ||| || | Sbjct 2521025 AATGCAGATCTTTGTCAAAACTCTGACAGGGAAGACCATCACCCTGGAAGTTGAAGCTTC 2520966 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 || || | | || || || ||| || ||| ||||| ||||| | || |||| Sbjct 2520965 AGATAC-GATAGAGAACGTGAAAGCCAAGATTCAAGATAAGGAAGGAATTCCACCAGATC 2520907 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| | | || | ||| || |||||||||||||||| | ||| | |||| |||| Sbjct 2520906 AGCAGCGTTTGATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTCTTTCCGACTATA 2520847 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 | || || || ||||||||| | ||| |||| ||| || | || ||||||| Sbjct 2520846 ATATACAGAAGGAGTCTACTCTGCATTTGGTCTTGCGACTTCGCGGAGGAA 2520796 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| || || ||||| ||||| ||||| ||||| ||| | || || | Sbjct 2520797 AATGCAAATCTTCGTGAAAACACTCACAGGAAAGACCATCACCTTGGAGGTTGAAGCTTC 2520738 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 || || | | || || |||||| || ||| ||||| ||||| | || |||| Sbjct 2520737 AGATAC-GATAGAGAACGTAAAAGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATC 2520679 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| | | || | ||| || |||||||||||||||| | ||| | |||| |||| Sbjct 2520678 AGCAGCGTTTGATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTCTTTCCGACTATA 2520619 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||| || || ||||| ||| | || |||| ||| | | || ||||||| Sbjct 2520618 ACATCCAGAAGGAGTCCACTCTTCACTTGGTCTTGCGTCTTCGCGGAGGAA 2520568 >seq7268 Length=409911 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || ||||| || ||||| ||||| | ||| ||| || | Sbjct 284392 ATGCAAATTTTTGTTAAGACTCTCACCGGTAAAACTATTACATTGGAAGTTGAGGCCTCC 284451 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | ||||| ||||| || ||||||||| | ||| |||||| Sbjct 284452 GATACTATTGAGAATGTAAAGGCGAAAATCCAAGACAAAGAAGGCATTCCCCCAGATCAG 284511 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || ||| | || | |||||||||||| | ||||||| || | | || || || Sbjct 284512 CAGAGATTAATCTTTGCGGGCAAACAGCTTGAAGATGGACGCACGCTTTCAGACTACAAT 284571 Query 115466 ATTCAAAAAGAGTCTACTATACAT 115489 |||||||| || || ||| | ||| Sbjct 284572 ATTCAAAAGGAATCCACTCTCCAT 284595 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| || || || || || || ||||| ||||| | ||| ||| || Sbjct 285076 ATGCAAATTTTCGTTAAGACTCTGACTGGTAAAACTATTACATTGGAAGTAGAGGCCTCT 285135 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | || || ||||||| ||||||||||| ||||| || ||| Sbjct 285136 GACACAATTGAGAATGTGAAGGCAAAAATTCAGGATAAAGAAGGGATCCCCCCGGAACAG 285195 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || ||| | || | ||| || || || | ||||||| | | || | ||||||| || Sbjct 285196 CAGAGATTGATCTTTGCCGGGAAGCAGCTTGAAGATGGCCACACGCTCTCCGATTACAAT 285255 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||||||| || || ||| | ||| | || ||| Sbjct 285256 ATTCAAAAGGAATCCACTCTCCATCTTGTATTG 285288 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || || || || ||||| || || | ||| ||| | | Sbjct 282568 ATGCAAATTTTTGTTAAGACCCTTACAGGTAAAACAATAACGCTGGAAGTTGAGGCATCC 282627 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | | || ||| |||||| || |||||||| | ||| || ||| Sbjct 282628 GATACTATTGAAAATGTCAAAGCTAAAATTCAAGACAAAGAAGGTATTCCCCCGGACCAG 282687 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || | || | || || ||||| | ||||||| | || | | || ||||| Sbjct 282688 CAGAGGTTGATCTTCGCTGGTAAACAGCTTGAAGATGGCCGCACACTTTCTGACTATAAT 282747 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||| || || ||| | ||| | || ||||| | |||||||| Sbjct 282748 ATTCAAAAGGAATCCACTCTCCATCTTGTACTGAGACTTCGAGGAGG 282794 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || |||||||| ||||| || || | ||| || || | Sbjct 286672 ATGCAAATTTTTGTAAAGACCCTCACGGGGAAAACAATAACGCTGGAAGTTGAAGCCTCC 286731 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | || || |||||| || |||||||| | ||| |||||| Sbjct 286732 GATACTATTGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAG 286791 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || ||| | || | || || ||||| | ||||||| | || | | || || || Sbjct 286792 CAGAGATTGATCTTCGCCGGTAAACAGCTCGAAGATGGCCGCACACTTTCTGACTACAAT 286851 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| || || | ||| | || ||| || | || ||||| Sbjct 286852 ATTCAAAAAGAATCCACCCTCCATCTTGTATTGCGACTCCGTGGAGG 286898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425278688295880