Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq10632 100 3e-16 seq7268 100 3e-16 seq11430 98.7 1e-15 seq7560 98.7 1e-15 seq4057 98.7 1e-15 seq12157 96.9 4e-15 seq5743 87.8 2e-12 seq10593 84.2 2e-11 seq7652 84.2 2e-11 seq7153 84.2 2e-11 >seq10632 Length=331853 Score = 100 bits (110), Expect = 3e-16 Identities = 73/84 (87%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 56998 AAAAAT--TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 |||||| || |||| |||| | |||||||||| ||||||||||||||||||||| || Sbjct 249248 AAAAATAATTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 249189 Query 57056 ACTCACCACTATACTACCGAGGAT 57079 ||| |||||||||||||||||||| Sbjct 249188 ACTGACCACTATACTACCGAGGAT 249165 >seq7268 Length=409911 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 ||||| || | ||||||||| ||||||||||||||| ||||| | ||||| || | Sbjct 286202 CGCAATACAAGATGCAATGTAGACTCCTTTTGAATATTATAATCTGAAAGAGTGCGGCCA 286143 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || ||||| ||||| ||||| || | ||||||||||| | ||| | ||||| || Sbjct 286142 TCTTCAAGCTGTTTACCGGCGAAGATCAACCGCTGCTGGTCTGGTGGGATTCTCTCTTTA 286083 Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173 ||| ||| || || | || | | ||||| | || || || | || || Sbjct 286082 TCCTGGATCTTCGCCTTCACATTCTCAATAGTGTCAGAGGCCTCTACTTCCAATGTAATA 286023 Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || || ||||| || || |||||||| Sbjct 286022 GTTTTACCAGTCAGAGTCTTAACGAAAATTTGCAT 285988 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 ||||| || | ||| | ||| || |||||||||||||| |||| || || || | Sbjct 286886 CGCAATACAAGATGGAGGGTGGATTCTTTTTGAATATTGTAGTCAGAAAGTGTGCGGCCA 286827 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || ||||| ||||| ||||| || | || |||||| || | || | | || ||| Sbjct 286826 TCTTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGAATACCTTCTTTG 286767 Query 42114 TCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 | | ||| |||| | |||| || | | || ||| | ||| || || | ||| || Sbjct 286766 T-CTTGAATTTTAGCCTTGACATTCTCAATAGTATCGGAGGCTTCAACTTCCAGCGTTAT 286708 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| ||||| || ||||||||||| |||||||| Sbjct 286707 TGTTTTCCCCGTGAGGGTCTTTACAAAAATTTGCAT 286672 Score = 93.3 bits (102), Expect = 5e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| | || |||||| || | |||||||| |||||||||||||||||| |||| Sbjct 283478 CCTCCACGTAGACGCAATACAAGGTGCAATGTAGACTCCTTTTGAATATTGTAGTCAGAA 283419 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || ||||| || || ||||| || | | ||| ||||| | || Sbjct 283418 AGTGTACGGCCATCTTCGAGCTGTTTGCCTGCGAAGATCAACCTCTGTTGGTCTGGGGGA 283359 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | || |||| | ||| |||| | ||||| | | | || ||| | || || Sbjct 283358 ATACCTTCTTTGT-CTTGAATTTTAGCTTTGACATTTTCTATAGTATCGGATGCCTCAAC 283300 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||| || ||||| || || || ||||| ||||| |||||||| Sbjct 283299 TTCCAGCGTTATTGTTTTACCTGTAAGGGTCTTAACAAAAATTTGCAT 283252 Score = 89.7 bits (98), Expect = 6e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||||| | |||| || | ||||| ||| ||| || |||||||||||||||| Sbjct 283022 CCTCCTCGAAGCCGCAGTACAAGATGCAGTGTAGACTCTTTCTGAATATTGTAATCAGAA 282963 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || ||||| || |||||||| || | | |||||| || | ||| Sbjct 282962 AGCGTTCGTCCATCTTCAAGCTGTTTGCCAGCGAAGATCAACCTCTGCTGATCAGGTGGA 282903 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | || |||| | ||| |||| | || | || | | |||||| || ||| || Sbjct 282902 ATACCTTCTTTGT-CTTGAATTTTCGCCTTCACGTTCTCTATCGTGTCAGACGCTTCAAC 282844 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | || || ||||| || || || ||||| || || |||||||| Sbjct 282843 CTCCAGAGTTATTGTTTTTCCTGTAAGGGTCTTAACGAAAATTTGCAT 282796 Score = 89.7 bits (98), Expect = 6e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| | | |||||| || | |||||||| |||||||||||||||||| |||| Sbjct 283250 CCTCCACGAAGACGCAATACAAGGTGCAATGTTGACTCCTTTTGAATATTGTAGTCAGAA 283191 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || ||||| || || ||||| || | | |||||| || | ||| Sbjct 283190 AGTGTGCGGCCATCTTCGAGCTGTTTGCCCGCGAAGATCAACCTCTGCTGATCTGGTGGA 283131 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | || |||| | ||| |||||| || | | | | ||||| || ||| || Sbjct 283130 ATACCTTCTTTGT-CTTGAATTTTTGCCTTAACATTTTCAATTGTGTCTGACGCTTCAAC 283072 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | || || ||||| || || || ||||| || || |||||||| Sbjct 283071 CTCCAGAGTTATTGTTTTTCCTGTAAGGGTCTTAACGAAAATTTGCAT 283024 Score = 89.7 bits (98), Expect = 6e-13 Identities = 154/220 (70%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064 ||||| ||| |||||||||||||||||| |||| || || || | || || ||||| Sbjct 285735 ATGCAGTGTAGACTCCTTTTGAATATTGTAGTCAGAAAGTGTGCGGCCATCTTCAAGCTG 285676 Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||||||||||| || | | ||||||||| | ||| | | ||| || ||| ||| | | Sbjct 285675 TTTACCAGCGAAGATCAACCTCTGCTGGTCTGGTGGTATTCCCTCTTTATCC-TGAATCT 285617 Query 42125 TTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCG 42183 ||| || | || | | ||||| | || || || | || || ||||| || | Sbjct 285616 TTGCCTTCACATTCTCAATAGTGTCAGAGGCCTCTACTTCCAATGTAATAGTTTTACCAG 285557 Query 42184 TTAGCGTCTTTACAAAGATTTGCATTTTCACGCCGAATAC 42223 | || ||||| || || ||||||| | ||| ||||| || Sbjct 285556 TCAGGGTCTTAACGAAAATTTGCA-TGCCACCCCGAAGAC 285518 Score = 82.4 bits (90), Expect = 8e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||| || | |||||||| |||||||||||||||||| |||| || || || | Sbjct 282555 ACGCAATACAAGGTGCAATGTAGACTCCTTTTGAATATTGTAGTCAGAAAGTGTGCGGCC 282496 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||| ||||| || || || | | |||||| || | ||| | | || || Sbjct 282495 ATCTTCGAGCTGTTTACCGGCAAAGATCAACCTCTGCTGATCTGGTGGAATACCTTCTTT 282436 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 || | ||| |||| | || | || | | |||||| | || || || | || | Sbjct 282435 GT-CTTGAATTTTCGCCTTCACGTTCTCAATTGTGTCGGAGGCCTCGACCTCCAGAGTTA 282377 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | ||||| || || || ||||| || || |||||||| Sbjct 282376 TTGTTTTTCCAGTAAGGGTCTTGACGAAAATTTGCAT 282340 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||||||||| || |||| || || || | || || ||||| ||||||||||| Sbjct 282758 TCCTTTTGAATATTATAGTCAGAAAGTGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAG 282699 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || | | ||||||||| | || | | || |||| | ||| |||| | ||||| | Sbjct 282698 ATCAACCTCTGCTGGTCCGGGGGAATACCTTCTTTGT-CTTGAATTTTAGCTTTGACATT 282640 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | || ||| | || || || | ||| || ||||| || || || ||||| || Sbjct 282639 TTCAATAGTATCGGATGCCTCAACTTCCAGCGTTATTGTTTTACCTGTAAGGGTCTTAAC 282580 Query 42197 AAAGATTTGCAT 42208 ||| |||||||| Sbjct 282579 AAAAATTTGCAT 282568 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||||||||| ||||| || | || || || | || || ||||| ||||||||||| Sbjct 286406 TCCTTTTGAATGTTGTAGTCCGAAAGTGTGCGGCCATCTTCCAGCTGTTTACCAGCGAAG 286347 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || | | ||||||||| | ||| | || ||| || ||| ||| | |||| || | | Sbjct 286346 ATCAACCTCTGCTGGTCTGGTGGGATGCCCTCTTTATCC-TGAATCTTTGCCTTCACATT 286288 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | || ||| | || || || | || || || ||||| || || ||||| || Sbjct 286287 CTCGATAGTATCGGAAGCCTCAACTTCTAAAGTAATAGTCTTGCCAGTGAGAGTCTTCAC 286228 Query 42197 AAAGATTTGCAT 42208 ||| |||||||| Sbjct 286227 AAAAATTTGCAT 286216 >seq11430 Length=555723 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 390917 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 390858 Query 57067 TACTACCGAGGATT 57080 |||||||||||||| Sbjct 390857 TACTACCGAGGATT 390844 >seq7560 Length=151759 Score = 98.7 bits (108), Expect = 1e-15 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 56991 GTTTATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCG 57050 ||||| ||| | | |||| |||| | |||||||||| |||||||||||||||||||| Sbjct 101970 GTTTAAAAAATAAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCG 101911 Query 57051 GACATACTCACCACTATACTACCGAGGAT 57079 | ||||| |||||||||||||||||||| Sbjct 101910 GGGATACTGACCACTATACTACCGAGGAT 101882 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063 ||||||| || | | |||||||||| ||||||||||||||||||||| ||||| |||| Sbjct 99954 TTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 99895 Query 57064 CTATACTACCGAGGA 57078 |||||||| |||||| Sbjct 99894 CTATACTATCGAGGA 99880 >seq4057 Length=754470 Score = 98.7 bits (108), Expect = 1e-15 Identities = 77/91 (85%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 56992 TTTATGAAAAATT--TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGC 57049 |||| |||||| | |||| |||| | |||||||||| ||||||||||||||||||| Sbjct 586161 TTTAGCAAAAATAAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGC 586220 Query 57050 GGACATACTCACCACTATACTACCGAGGATT 57080 || ||||| ||||||||||||||||||||| Sbjct 586221 GGGGATACTGACCACTATACTACCGAGGATT 586251 Score = 98.7 bits (108), Expect = 1e-15 Identities = 77/91 (85%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 56992 TTTATGAAAAATT--TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGC 57049 |||| |||||| | |||| |||| | |||||||||| ||||||||||||||||||| Sbjct 590806 TTTAGCAAAAATAAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGC 590747 Query 57050 GGACATACTCACCACTATACTACCGAGGATT 57080 || ||||| ||||||||||||||||||||| Sbjct 590746 GGGGATACTGACCACTATACTACCGAGGATT 590716 >seq12157 Length=907674 Score = 96.9 bits (106), Expect = 4e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 250030 TTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 250089 Query 57065 TATACTACCGAGGATTGA 57082 ||||||| ||||||| || Sbjct 250090 TATACTATCGAGGATAGA 250107 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063 ||||||| || | | |||||||||| ||||||||||||||||||||| ||||| |||| Sbjct 251134 TTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 251193 Query 57064 CTATACTACCGAGGA 57078 |||||||| |||||| Sbjct 251194 CTATACTATCGAGGA 251208 >seq5743 Length=292356 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 83337 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 83396 Query 57067 TACTACCGAGGAT 57079 ||||| ||||||| Sbjct 83397 TACTATCGAGGAT 83409 >seq10593 Length=434019 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 5/86 (6%) Strand=Plus/Plus Query 56999 AAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||||| ||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 416413 AAAATTTGGGTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 416472 Query 57058 TCACCACT----ATACTACCGAGGAT 57079 | |||||| |||||||||||||| Sbjct 416473 TGACCACTATACATACTACCGAGGAT 416498 >seq7652 Length=136160 Score = 84.2 bits (92), Expect = 2e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||| || |||||| || | | | |||||||| ||||||||||||||||||||| |||| Sbjct 84829 AAAGATATTCTCCCCGACGGGGAGTCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 84888 Query 57058 TCACCACTATACTACCGAGGA 57078 | ||| |||||||| |||||| Sbjct 84889 TGACCGCTATACTATCGAGGA 84909 >seq7153 Length=494819 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 || ||| || |||||| || | | | |||||||| ||||||||||||||||||||| | Sbjct 433258 ATAAAAGATATTCTCCCCGACGGGGAGTCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 433317 Query 57055 TACTCACCACTATACTACCGAGGA 57078 |||| ||| |||||||| |||||| Sbjct 433318 TACTGACCGCTATACTATCGAGGA 433341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543127250774160