Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq8549 154 1e-31 seq6243 149 5e-30 seq4708 127 2e-23 seq8037 102 6e-16 seq9559 89.7 4e-12 seq7163 86.0 5e-11 >seq8549 Length=361584 Score = 154 bits (170), Expect = 1e-31 Identities = 153/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 518155 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 518214 |||||||| | ||||||| | |||||||||| |||||| || ||||| ||||| || | Sbjct 31969 TTTGTCTTCGGTTTTATCCATGCCATACGCAAGAGCAGCTGCTGTTGGCTCATTGATTAC 32028 Query 518215 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 518274 ||| | |||||||||||||| || || |||||||| || ||||||||||| ||||| Sbjct 32029 TCTAAGCACATTAAGACCAGCGATCTGGCCAGCATCTTTCGTTGCTTGTCTTTGCGAATC 32088 Query 518275 GTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCT 518334 ||||||||||||||||||||||| || |||| | ||| ||| | ||| || Sbjct 32089 ATTAAAATATGCAGGAACAGTAATTACAGCATTTCTGACTGAAGTACTTAAATATGCTTC 32148 Query 518335 TGCCGTTTGTTTCATTTT 518352 ||| |||| |||||||| Sbjct 32149 TGCGGTTTCCTTCATTTT 32166 Score = 93.3 bits (102), Expect = 3e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 || || |||||||| ||||| ||||| ||||| |||| | |||| |||| | ||| || Sbjct 31991 CCATACGCAAGAGCAGCTGCTGTTGGCTCATTGATTACTCTAAGCACATTAAGACCAGCG 32050 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 || | ||| ||| ||||||||||| || | |||||||||||||| || |||||| Sbjct 32051 ATCTGGCCAGCATCTTTCGTTGCTTGTCTTTGCGAATCATTAAAATATGCAGGAACAGTA 32110 Query 322364 ATAACTGCTTT 322374 || || || || Sbjct 32111 ATTACAGCATT 32121 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 517270 AAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGC 517329 || ||| ||||||||||| | |||||| |||||||| ||||| || || |||||| | || Sbjct 29084 AACAATGCCATTGGCATCGATATCAAACGTGACTTCTATTTGTGGCACTCCTCTCGGTGC 29143 Query 517330 AGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCG 517389 ||||| || || | | | ||||| ||||| | ||||| || |||| | || ||| Sbjct 29144 GGGTGGAATACCAACAAGAGTAAATTGTCCCAAAAGTTTATTGTCATTAGCCATTTCTCG 29203 Query 517390 TTCACCCT 517397 |||||||| Sbjct 29204 TTCACCCT 29211 >seq6243 Length=857481 Score = 149 bits (164), Expect = 5e-30 Identities = 673/1048 (64%), Gaps = 18/1048 (2%) Strand=Plus/Plus Query 517275 TACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTG 517334 ||||||||| || | || || || |||||||| ||||||| || ||| | ||||||| Sbjct 290546 TACCATTGGAGTCAATGTCGAAGGTAACTTCAATCTGAGGGATTCCCCTCGGCGCAGGTG 290605 Query 517335 GGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCAC 517394 | || || | | || | |||||| |||||||||| | || | |||||| | Sbjct 290606 GAATGCCCGTGAGCTCGAACTTGCCCAGAATATTATTATCCCTGGTCATAGCTCGTTCTC 290665 Query 517395 CCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGG 517454 |||| ||| || || ||| ||| || || || || || || || || ||||| Sbjct 290666 CCTCATAAACCTGAATCAACACTCCAGGCTGGTTGTCGGAGTAGGTGGTGAACG-TCTGG 290724 Query 517455 ATTTTTTACAAGGA-ATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 | | || | || || || ||||| || | || | | ||||| | || || || Sbjct 290725 GTCTGTTTCGTGGGTATCGTGGTGTTCCTCTTGATCAAGGTAGTCATCACGCCTCCAGCA 290784 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 517573 || || | ||| || || ||||| || || || | || | | || |||| | ||| Sbjct 290785 GTCTCGATACCGAGCGACAGAGGCGTCACGTCCAAGAGCAACAGATCCTGAACCTGTTCG 290844 Query 517574 TCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATC 517632 | | ||| ||||| | || ||||| | ||| || ||||| || |||||||| || Sbjct 290845 GATTTGTCACCGTGCAAGATT-GCAGCTTGCACAGCGGCGCCATAGGCGACAGCTTCGTC 290903 Query 517633 AGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT-A 517691 ||| || | | | || | || ||| || ||||| |||| | || || | ||| | Sbjct 290904 AGGGTTGATCGACTTGTTCAATTCTTTGCCGTTGAAGAAATCTTGCAGTAGCT-TCTGGA 290962 Query 517692 CCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCA 517751 ||| || || | | ||||| || |||| || || || | ||||||||| |||| Sbjct 290963 TCTTTGGTATCCTGGTGGATCCACCGACTAGAACGATGCTGTGAATCTGTGATTTGTCCA 291022 Query 517752 GTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTC-TAAACAAGTCTGAA 517810 || | |||| | | | || || || || || ||| |||| | || | || | Sbjct 291023 TCTTGGCATCCCTGAGAGCCTTCTCCACTGGCTCCAGAGT-GCTCCTGAAGAGATCAGCG 291081 Query 517811 CAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACA 517868 || ||||| ||||| ||||||||||| | ||| | || || || ||||||||||||| Sbjct 291082 CAGAGTTCCTCGAACCTAGCTCTAGTA--ACCGACGTGTAGAAGTCGATTCCTTCGAACA 291139 Query 517869 AAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA--AGATAGTGCACGTTTAGCACGTTC 517926 || || | || || | | ||||||||||| || ||| | | || || | ||| Sbjct 291140 GGGAGTCGATCTCTATGCTGGCCTGAGTCGAAGAGCTGAGAGTCCTC--TTGGCTCTTTC 291197 Query 517927 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGA-TTCAAATCTGTTTTATATT 517985 || ||||| || | | || | ||| | | || | || | | || | || || | Sbjct 291198 GCAGGCTGTTCTCA-ACCTCCTCAGGGCTCTCTTGTTCGAGCTGAGGTCCTTCTTGTACT 291256 Query 517986 TTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCA 518045 | |||| ||| || | || | | || | | || || || || || || || | Sbjct 291257 TCCTCTGGAACTCCTGCACGAAGTGGTTCACCATCCTGTTGTCGAAGTCCTCGCCACCAA 291316 Query 518046 ATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAG 518105 | ||| | ||| | || | | | || | ||| | || || || | | || | | Sbjct 291317 GGTGAGTGTCTCCGGCTGTCGATTTCACCTCGAAGATGCCCTCCTCGATCGTCAGGACCG 291376 Query 518106 TTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGT 518165 ||||| || ||||| || | ||| || || || |||||| | || | || Sbjct 291377 ACACATCGAACGTGCCACCTCCTAGATCGAAGATCAGGACATTCTTCTCGCCGGCTGATC 291436 Query 518166 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 518225 | || || | |||||| || | ||||| || |||||||| || || || || | ||| | Sbjct 291437 TCTTGTCCAAACCATAAGCGATCGCAGCTGCGGTTGGTTCGTTGATGATCCTGAGAACGT 291496 Query 518226 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 518285 | || || || || || || ||||| || || ||||| || |||||||| || |||| Sbjct 291497 TCAGGCCCGCGATCGCGCCAGCGTCTTTCGTTGCCTGTCTCTGGGAATCGTTGAAGTATG 291556 Query 518286 CAGGAACAGTAATAACGGCATCAGTTAC 518313 | || || || || || || || ||||| Sbjct 291557 CTGGCACTGTGATGACTGCGTCCGTTAC 291584 >seq4708 Length=1099944 Score = 127 bits (140), Expect = 2e-23 Identities = 567/892 (64%), Gaps = 16/892 (2%) Strand=Plus/Minus Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324 ||||| || ||||| || || || | ||||| |||||||| |||||||| || || | Sbjct 782939 ACATTTAGGATACCGTTCGCGTCGATGTCAAAGGTGACTTCGATTTGAGGAACACCACGA 782880 Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 517384 | || |||||||| || | | ||| | |||||| ||| || || || || | Sbjct 782879 GGTGCTGGTGGGATTCCGCTGAGCTCGAATTTACCCAGAAGATTGTTGTCCTTCGTCATA 782820 Query 517385 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 517444 ||| || |||||| | | |||||| || | | ||| ||||| | || || || Sbjct 782819 GCTCGCTCTCCCTCGTAGACTTGGATCAATACACCGGGTTGGTTATCGGCGTAGGTAGTG 782760 Query 517445 AATACTCTGGATTTTTTACAA-GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 517503 || | | || ||| || | || || || ||||| || | || | | ||||| | Sbjct 782759 AA-AGTTTGAGTTTGTTTCGTTGGGATGGTCGTGTTCCTCTTGATGAGAGCAGTCATGAC 782701 Query 517504 ACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 517563 ||| || || ||||| | ||| || || ||||| || || || | || | | | ||| Sbjct 782700 ACCGCCAGCAGTTTCAATACCGAGGGACAGAGGTGTAACGTCGAGAAGCAGCAAGTCTTG 782641 Query 517564 AAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 517623 | |||| | | |||| || || || ||||| | ||||| ||||| || || Sbjct 782640 TACGGCTTCAGATTTGTCACCATGCAGGATGGCAGCTTGCACGGCAGCTCCATAAGCTAC 782581 Query 517624 AGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAA 517682 ||| ||||||||||| | | || || | | ||| |||||||| || | || || | Sbjct 782580 AGCCTCATCAGGATTGATGGATTTGTTCAACTCTTTGCCATTGAAGAAGTCCTGCAACAG 782521 Query 517683 GTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTG 517742 || | | ||| || ||||| | ||||| || || || || || || || | || | Sbjct 782520 CTTCT-GAATCTTCGGGATACGGGTGGATCCACCTACCAAGACGATGTCGTGAATTTGAG 782462 Query 517743 ATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACA 517802 || |||| || | ||| | ||| || || || || || |||| || | Sbjct 782461 CCTTGTCCATCTTAGCATCGCGCAGCGATTTCTCTACCGGCTCGAGTGTTCCTCTGAAGA 782402 Query 517803 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTT 517862 || | || || |||||||| ||| || || | | | | |||||| ||| | Sbjct 782401 GATCAGCGCAGAGCTCTTCGAAACGAGCCCTTGTGATCGAGGTGTAGAAATCAACTCCCT 782342 Query 517863 CGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCAC 517922 | | | ||||| | ||||||||| | || || || || || | | ||| || || | Sbjct 782341 CATAGAGGGAATCGATTTCAATCGTTGCCTGTGTAGATGACGACAAAGTACGCTTCGCGC 782282 Query 517923 GTTCACATGCTGTCCTTAGTCTTCGTA----AGGCT--TTTGCTGATTGATTCAAATCTG 517976 | ||||| | |||| || | || | | ||| || || | ||| ||| Sbjct 782281 GCTCACAAGAAGTCCGAAGACGACGGAGAGCACGCTTGTTAGCGG------TCAGGTCTT 782228 Query 517977 TTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTT 518036 | || ||||| | |||||| || | || | | || | ||| ||||||||||||| Sbjct 782227 TCTTGTATTTACGCTTGAACTCCTGTACGAAGTGGTTGACCATACGGTTATCAAAATCTT 782168 Query 518037 CACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAG 518096 |||| || | | ||| | ||| | || | | || | || | |||||||||| | Sbjct 782167 CACCGCCAAGGTGAGTGTCTCCAGCAGTGGACTTGACCTCAAATATGCCATCTTCAATGG 782108 Query 518097 ACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148 ||||| || |||||| ||| || ||||| | ||| || || || || || Sbjct 782107 TCAAAATAGACACATCAAAGGTGCCGCCACCAAGATCGAAGATTAGGACGTT 782056 Score = 86.0 bits (94), Expect = 5e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 518554 TTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGG 518613 ||| | |||||| ||||| || || | |||| || |||||||| | ||||| || Sbjct 779838 TTGGTTTTTGGCCGCATCGCCGATTAACCGTTCGGTATCTGTAAACGCCACATAGCTGGG 779779 Query 518614 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACC 518673 ||||| || || ||||||||||| || || ||||| ||||| |||| || | ||||| Sbjct 779778 TGTTGTTCGGTTTCCTTGATCATTGGCGATGATTTCCACTTTTCCATGCTGGAAGACACC 779719 Query 518674 TACACAACTAAAAGTTGTTCCTAAATCAATACCAA 518708 ||||| | || || || | ||||||||||| Sbjct 779718 AACACAGGAGTAGGTGGTACCAAGATCAATACCAA 779684 Score = 86.0 bits (94), Expect = 5e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 518525 AAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT 518584 || || || ||| | || || || || |||| | |||||| ||||| || || | || Sbjct 780156 AAGATTGTGTTGTTGGGGTTCATGGCGACTTGGTTTTTGGCGGCATCACCGATTAACCGT 780097 Query 518585 TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATA 518644 || || |||||||| | ||||| || ||||| || || ||||||||||| || || Sbjct 780096 TCGGTATCTGTAAACGCCACATAGCTGGGTGTTGTTCGGTTTCCTTGATCATTGGCGATG 780037 Query 518645 ATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 ||||| ||||| |||| || | ||||| ||||| Sbjct 780036 ATTTCCACTTTTCCATGCTGGAAGACACCAACACA 780002 >seq8037 Length=820807 Score = 102 bits (112), Expect = 6e-16 Identities = 281/424 (66%), Gaps = 9/424 (2%) Strand=Plus/Plus Query 518259 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTT 518318 ||||||| || | ||||| || || || || || |||| ||| |||| ||| |||| | Sbjct 410905 CTTGTCTCTGAGCGTCGTTGAAGTAGGCTGGCACGGTAACAACCGCATGAGTAACTTTCT 410964 Query 518319 TACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 518378 | || | ||| || ||| |||| ||||||||||| | || ||| | || |||| || Sbjct 410965 TGCCCAAATACGCCTCTGCAGTTTCTTTCATTTTACCGAGAACCATAGCAGAGATTTCTT 411024 Query 518379 CTGGGG--AATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACC 518436 | || | || ||| || ||| | || ||| | | ||||| | Sbjct 411025 CGGGAGCAAAAATT--TTATCTTCGCCGTTCACCGACACTCTTATGTGAGGTTTGCTGTT 411082 Query 518437 AACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAA 518496 | || ||||||||||| || | || || || || ||| | |||| | Sbjct 411083 CTTTTCGATTACTTTAAATGGGAAGAACTTGATGTCGTGCTGCACAGTAGGGTCCGACCA 411142 Query 518497 ATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATT-AATTGCAGCTT 518555 || |||||||| || ||||| ||||| || | |||||| |||||| | || | | Sbjct 411143 CTCCCTACCAATCAACCGTTTCGCATCGAACACAGTATTTTCTGGATTGGAGGTCAAC-T 411201 Query 518556 GATATTTGGCTGCATCTCCAATCAGATGTT--CTGTC-TCTGTAAATGAAACATATGATG 518612 ||| ||| || ||||||||||||||| ||| | ||| | ||||| | || ||||| | Sbjct 411202 GATTTTTCGCAGCATCTCCAATCAGACGTTCGCCGTCGGCGGTAAACGCTACGTATGAAG 411261 Query 518613 GAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACAC 518672 | || | | || |||||||| || || |||||||| || | ||||||| |||||| Sbjct 411262 GTGTAATTCTGTTTCCTTGATCGTTAGCTATAATTTCTGCTCTGCCATTTTTATATACAC 411321 Query 518673 CTAC 518676 | || Sbjct 411322 CGAC 411325 >seq9559 Length=304933 Score = 89.7 bits (98), Expect = 4e-12 Identities = 114/154 (74%), Gaps = 6/154 (4%) Strand=Plus/Minus Query 367000 GCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCATTAT 367059 || |||||||| ||||| ||||| ||| | ||||| |||| | |||| || ||| Sbjct 74841 GCAACAATAGCGTTTGGAATGGGAATTGACAAACCAAATGTACGTTTTGTAATGCAT--- 74785 Query 367060 GGAGCTC-CCAAGAAT--ATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGAT 367116 | ||||| || | ||| ||||||||||| |||||||||| ||| | || || || ||| Sbjct 74784 GCAGCTCTCCCAAAATCGATTGAAGGTTACTATCAAGAAAGCGGTCGCGCTGGACGCGAT 74725 Query 367117 GGAGAAAAATCTTATTGTTATGCATTTTATAATT 367150 |||||||| | | ||| | ||||||||||| Sbjct 74724 GGAGAAAACGCAGACTGTATTTTATTTTATAATT 74691 >seq7163 Length=1251421 Score = 86.0 bits (94), Expect = 5e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 518554 TTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGG 518613 ||| | |||||| ||||| || || | |||| || |||||||| | ||||| || Sbjct 280011 TTGGTTTTTGGCCGCATCGCCGATTAACCGTTCGGTATCTGTAAACGCCACATAGCTGGG 279952 Query 518614 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACC 518673 ||||| || || ||||||||||| || || ||||| ||||| |||| || | ||||| Sbjct 279951 TGTTGTTCGGTTTCCTTGATCATTGGCGATGATTTCCACTTTTCCATGCTGGAAGACACC 279892 Query 518674 TACACAACTAAAAGTTGTTCCTAAATCAATACCAA 518708 ||||| | || || || | ||||||||||| Sbjct 279891 AACACAGGAGTAGGTGGTACCAAGATCAATACCAA 279857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780197196118894