Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq4708 280 2e-70 seq6243 226 4e-54 seq8296 123 3e-23 seq8549 89.7 7e-13 >seq4708 Length=1099944 Score = 280 bits (310), Expect = 2e-70 Identities = 662/997 (66%), Gaps = 2/997 (0%) Strand=Plus/Minus Query 6583 ATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAAT-CTCCCCTTAT 6641 ||| || || || || | |||||| |||||||||||||||| | ||| | ||||| | Sbjct 783051 ATATTTCTCTGCTTCGTTGACCATTCTTTCAATGTCTTCTTT-GCTAAGACGGCCCTTGT 782993 Query 6642 CATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCA 6701 | || || || || ||||| | ||| || | | ||| || | || ||||| | Sbjct 782992 CGTTGGTGATGGTGATCTTGTTCTCTTTGCCAGTAGACTTGTCCACTGCGGAGACATTTA 782933 Query 6702 AAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGG 6761 ||||| || || || | || || | || | ||||| || ||| | ||||| | Sbjct 782932 GGATACCGTTCGCGTCGATGTCAAAGGTGACTTCGATTTGAGGAACACCACGAGGTGCTG 782873 Query 6762 CTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTT 6821 ||| || || | | || ||| |||| || | | |||| ||| ||| | | || | Sbjct 782872 GTGGGATTCCGCTGAGCTCGAATTTACCCAGAAGATTGTTGTCCTTCGTCATAGCTCGCT 782813 Query 6822 CACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTT 6881 | || || ||||||| || || | ||||| ||||| || | ||| ||| Sbjct 782812 CTCCCTCGTAGACTTGGATCAATACACCGGGTTGGTTATCGGCGTAGGTAGTGAAAGTTT 782753 Query 6882 GTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCA 6941 | || || | ||| || ||||| || ||| || | | ||||| | ||| || Sbjct 782752 GAGTTTGTTTCGTTGGGATGGTCGTGTTCCTCTTGATGAGAGCAGTCATGACACCGCCAG 782693 Query 6942 TAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATT 7001 |||||| | || || ||||||||||| ||||| | || | || |||||| || | || Sbjct 782692 CAGTTTCAATACCGAGGGACAGAGGTGTAACGTCGAGAAGCAGCAAGTCTTGTACGGCTT 782633 Query 7002 CGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCAT 7061 | ||||| | |||||| ||||| || | || || || || || ||||||| Sbjct 782632 CAGATTTGTCACCATGCAGGATGGCAGCTTGCACGGCAGCTCCATAAGCTACAGCCTCAT 782573 Query 7062 CGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAA 7121 | || || || | ||| |||| ||||| || || || | ||| |||| | |||| Sbjct 782572 CAGGATTGATGGATTTGTTCAACTCTTTGCCATTGAAGAAGTCCTGCAACAGCTTCTGAA 782513 Query 7122 TTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGA 7181 | |||||||| || || |||||||| ||||| ||||| || | | || | || || | Sbjct 782512 TCTTCGGGATACGGGTGGATCCACCTACCAAGACGATGTCGTGAATTTGAGCCTTGTCCA 782453 Query 7182 TCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATAC 7241 |||| | || || || | ||| || || || || | | | ||| | || | Sbjct 782452 TCTTAGCATCGCGCAGCGATTTCTCTACCGGCTCGAGTGTTCCTCTGAAGAGATCAGCGC 782393 Query 7242 ACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACG 7301 | || || || ||||| || | || || || || ||||||||||| || || || | | Sbjct 782392 AGAGCTCTTCGAAACGAGCCCTTGTGATCGAGGTGTAGAAATCAACTCCCTCATAGAGGG 782333 Query 7302 AATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 |||| |||||||| |||| |||| | || || || || ||||| ||||||||||| | Sbjct 782332 AATCGATTTCAATCGTTGCCTGTGTAGATGACGACAAAGTACGCTTCGCGCGCTCACAAG 782273 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 || || | |||||| || |||||| |||| ||| | |||||||| | |||||| | Sbjct 782272 AAGTCCGAAGACGACGGAGAGCACGCTTGTTAGCGGTCAGGTCTTTCTTGTATTTACGCT 782213 Query 7422 TAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481 | ||||| | |||||| | | | ||| ||||||||||| || | ||| | Sbjct 782212 TGAACTCCTGTACGAAGTGGTTGACCATACGGTTATCAAAATCTTCACCGCCAAGGTGAG 782153 Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541 | || || || || | ||||| ||||| || || |||||||| | || | || |||| Sbjct 782152 TGTCTCCAGCAGTGGACTTGACCTCAAATATGCCATCTTCAATGGTCAAAATAGACACAT 782093 Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 |||| || || ||||| || || || || || ||||| Sbjct 782092 CAAAGGTGCCGCCACCAAGATCGAAGATTAGGACGTT 782056 >seq6243 Length=857481 Score = 226 bits (250), Expect = 4e-54 Identities = 719/1111 (65%), Gaps = 8/1111 (1%) Strand=Plus/Plus Query 6705 TACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTG 6764 ||||||| | |||| ||||| | || | ||| || || | |||||||| || | || Sbjct 290546 TACCATTGGAGTCAATGTCGAAGGTAACTTCAATCTGAGGGATTCCCCTCGGCGCAGGTG 290605 Query 6765 GAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCAC 6824 |||| ||||| | || || | || || | | | |||||| | | | | ||||| | Sbjct 290606 GAATGCCCGTGAGCTCGAACTTGCCCAGAATATTATTATCCCTGGTCATAGCTCGTTCTC 290665 Query 6825 CTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGT- 6883 | ||||| || | ||| ||| |||| || || || || | ||| | || Sbjct 290666 CCTCATAAACCTGAATCAACACTCCAGGCTGGTTGTCGGAGTAGGTGGTGAACGTCTGGG 290725 Query 6884 TCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATA 6943 ||| | || | || ||||| || || ||| || | | ||||| | || || | Sbjct 290726 TCTGT-TTCGTGGGTATCGTGGTGTTCCTCTTGATCAAGGTAGTCATCACGCCTCCAGCA 290784 Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCG 7003 || |||| || || |||||||| |||||||||||||| ||||| || ||||| |||| Sbjct 290785 GTCTCGATACCGAGCGACAGAGGCGTCACGTCCAAGAGCAACAGATCCTGAACCTGTTCG 290844 Query 7004 TTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCG 7063 ||||| ||||| || ||||| || | || || || ||||| || || || Sbjct 290845 GATTTGTCACCGTGCAAGATTGCAGCTTGCACAGCGGCGCCATAGGCGACAGCTTCGTCA 290904 Query 7064 GGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATT 7123 ||||| |||| || |||| |||||| ||||| || |||| | | | || || Sbjct 290905 GGGTTGATCGACTTGTTCAATTCTTTGCCGTTGAAGAAATCTTGCAGTAGCTTCTGGATC 290964 Query 7124 TTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATC 7183 || || || | || ||||||||||| | |||||| | | | ||||| || ||| Sbjct 290965 TTTGGTATCCTGGTGGATCCACCGACTAGAACGATGCTGTGAATCTGTGATTTGTCCATC 291024 Query 7184 TTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACAC 7243 || | || | || | || || || || |||| | | | ||| | || || Sbjct 291025 TTGGCATCCCTGAGAGCCTTCTCCACTGGCTCCAGAGTGCTCCTGAAGAGATCAGCGCAG 291084 Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 |||||||| || | || | |||| || || ||||| || | || ||| | | || Sbjct 291085 AGTTCCTCGAACCTAGCTCTAGTAACCGACGTGTAGAAGTCGATTCCTTCGAACAGGGAG 291144 Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGA---TAACGTTCGCTTTGCGCGCTCACAC 7360 || || || ||| | | || |||||||| | || | ||| || | || || Sbjct 291145 TCGATCTCTATGCTGGCCTG---AGTCGAAGAGCTGAGAGTCCTCTTGGCTCTTTCGCAG 291201 Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGT 7420 || |||| || | | ||||| | | ||| | | || ||||| | || | Sbjct 291202 GCTGTTCTCAACCTCCTCAGGGCTCTCTTGTTCGAGCTGAGGTCCTTCTTGTACTTCCTC 291261 Query 7421 TTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 | ||||| | |||||| | | || ||||| || || ||||| | ||| Sbjct 291262 TGGAACTCCTGCACGAAGTGGTTCACCATCCTGTTGTCGAAGTCCTCGCCACCAAGGTGA 291321 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 || || || || |||| ||| || || ||||| || | || || | | | ||| ||| Sbjct 291322 GTGTCTCCGGCTGTCGATTTCACCTCGAAGATGCCCTCCTCGATCGTCAGGACCGACACA 291381 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTA 7600 || ||||| ||||| || || || || || || || ||| | ||| || || |||| Sbjct 291382 TCGAACGTGCCACCTCCTAGATCGAAGATCAGGACATTCTTCTCGCCGGCTGATCTCTTG 291441 Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 || | ||| || ||||| || || || |||||||| || || || | ||| ||||||| Sbjct 291442 TCCAAACCATAAGCGATCGCAGCTGCGGTTGGTTCGTTGATGATCCTGAGAACGTTCAGG 291501 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 || || || | | || |||||||| || |||| || |||||||| ||||| || || Sbjct 291502 CCCGCGATCGCGCCAGCGTCTTTCGTTGCCTGTCTCTGGGAATCGTTGAAGTATGCTGGC 291561 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || || | ||| |||||||| || || || |||| || || | || ||||| Sbjct 291562 ACTGTGATGACTGCGTCCGTTACCAAGACTCCCAGGTACGCCTCTGCCGTTTCCTTCATC 291621 Query 7781 TTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 || || || |||||||| || | |||||||| Sbjct 291622 TTCGTCAGCACCATCGACGACACCTCTTCAG 291652 >seq8296 Length=186150 Score = 123 bits (136), Expect = 3e-23 Identities = 195/274 (71%), Gaps = 8/274 (3%) Strand=Plus/Plus Query 183309 ATTTTGTAAATATATACCTGGTTTGACTCGCGTCTTTACCACCCATGAGACGTGTACCAA 183368 ||| || ||||||| || ||| | || |||||||| || ||| | || |||||||||| Sbjct 26882 ATTGTGAAAATATA-ACGTGGGCTCGCT-GCGTCTTTTCCTCCCGTTAGTCGTGTACCAA 26939 Query 183369 ATTGACCACATGGTTCGAGTAAATTAATATTATTCGACCCCGTAAAATTATGTGCTAATT 183428 ||||||| ||| | ||| || ||||| ||||| ||| ||||| ||||| | | Sbjct 26940 ATTGACCGATTGGCTGGAGCAAGTTAATGTTATTGCTTCCCACGAAATTTTGTGCGAGAT 26999 Query 183429 TTACAATTGTATCTGCCA-AAGAGAC--TTCACCGTGGTGATACGATGTTTTTTCCGAAA 183485 | | |||||| ||||| ||||||| ||||||||||||||||| || | ||| | | Sbjct 27000 TAATAATTGT---TGCCATAAGAGACATTTCACCGTGGTGATACGCTGAATGTTCAGCCA 27056 Query 183486 CGTATGCGGCTAATTGCGCAACCTTCATTTCAGATGTAAGATTCTTTGTGAAACACGCGT 183545 | | | ||||| || ||||| |||| |||| | || || | | | || | || Sbjct 27057 CAGAACCAGCTAACTGAGCAACTTTCACTTCACGTTTATCGTTACGTTTTATGCAAGTGT 27116 Query 183546 ATAACACTTTTCGTTGGGATGGTTTTAAACCATC 183579 |||||||||||| ||| ||||| || ||||| Sbjct 27117 ATAACACTTTTCTTTGTCCAGGTTTGAAGCCATC 27150 Score = 123 bits (136), Expect = 3e-23 Identities = 195/274 (71%), Gaps = 8/274 (3%) Strand=Plus/Plus Query 183309 ATTTTGTAAATATATACCTGGTTTGACTCGCGTCTTTACCACCCATGAGACGTGTACCAA 183368 ||| || ||||||| || ||| | || |||||||| || ||| | || |||||||||| Sbjct 29491 ATTGTGAAAATATA-ACGTGGGCTCGCT-GCGTCTTTTCCTCCCGTTAGTCGTGTACCAA 29548 Query 183369 ATTGACCACATGGTTCGAGTAAATTAATATTATTCGACCCCGTAAAATTATGTGCTAATT 183428 ||||||| ||| | ||| || ||||| ||||| ||| ||||| ||||| | | Sbjct 29549 ATTGACCGATTGGCTGGAGCAAGTTAATGTTATTGCTTCCCACGAAATTTTGTGCGAGAT 29608 Query 183429 TTACAATTGTATCTGCCA-AAGAGAC--TTCACCGTGGTGATACGATGTTTTTTCCGAAA 183485 | | |||||| ||||| ||||||| ||||||||||||||||| || | ||| | | Sbjct 29609 TAATAATTGT---TGCCATAAGAGACATTTCACCGTGGTGATACGCTGAATGTTCAGCCA 29665 Query 183486 CGTATGCGGCTAATTGCGCAACCTTCATTTCAGATGTAAGATTCTTTGTGAAACACGCGT 183545 | | | ||||| || ||||| |||| |||| | || || | | | || | || Sbjct 29666 CAGAACCAGCTAACTGAGCAACTTTCACTTCACGTTTATCGTTACGTTTTATGCAAGTGT 29725 Query 183546 ATAACACTTTTCGTTGGGATGGTTTTAAACCATC 183579 |||||||||||| ||| ||||| || ||||| Sbjct 29726 ATAACACTTTTCTTTGTCCAGGTTTGAAGCCATC 29759 >seq8549 Length=361584 Score = 89.7 bits (98), Expect = 7e-13 Identities = 141/197 (72%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 7588 GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG 7647 ||||| | | ||||| | || ||||| | ||| || || ||||| ||||| || | | Sbjct 31972 GTCTTCGGTTTTATCCATGCCATACGCAAGAGCAGCTGCTGTTGGCTCATTGATTACTCT 32031 Query 7648 AAG-ACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCGTTGCGAATCG 7705 ||| ||| || || ||||| || | ||| ||||||||||| ||||||| ||||||||| Sbjct 32032 AAGCACA-TTAAGACCAGCGATC-TGGCCAGCATCTTTCGTTGCTTGTCTTTGCGAATCA 32089 Query 7706 TTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCC 7765 ||||| || || || || || | || || | ||||| ||| | ||| | ||| Sbjct 32090 TTAAAATATGCAGGAACAGTAATTACAGCATTTCTGACTGAAGTACTTAAATATGCTTCT 32149 Query 7766 GCGATATCTTTCATTTT 7782 ||| | || |||||||| Sbjct 32150 GCGGTTTCCTTCATTTT 32166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635032774523160