Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq4730 131 1e-25 seq4277 100 2e-16 seq7268 95.1 8e-15 >seq4730 Length=3448589 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| | | | |||||||||||| | ||| ||| ||||| ||||| ||||| | Sbjct 2521252 TTCCTCCGCGAAGACGCAAAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTG 2521311 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 | || ||||| | || || | |||||| || ||||| |||| ||||| || || | | Sbjct 2521312 ATAGAGTTCGTCCGTCTTCTAACTGTTTACCAGCAAAGATTAAACGTTGTTGTTCGGGAG 2521371 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || ||||| || ||||| ||| ||| | |||||| || ||||||| Sbjct 2521372 GTATTCCTTCCTTATCTTGTATCTTAGCTTTCACGTTTTCTATCGTGTCCGAAGCCTCAA 2521431 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || | ||| |||||||| |||||||| || || ||||||||||||||| Sbjct 2521432 CTTCCAGGGTGATGGTTTTACCCGTGAGTGTTTTTACAAAGATCTGCATA 2521481 Score = 116 bits (128), Expect = 2e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| || ||||| ||||||||||| ||||| ||| |||| ||| Sbjct 2521044 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTATAGTCGGAAAGTGTTCTACCATCTTCC 2521103 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||||||||| || || || | || ||||| ||| | || | || ||||| || | Sbjct 2521104 AACTGTTTTCCAGCGAAGATCAAACGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGA 2521163 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||| || |||||| || || ||||| || | ||| ||||| ||| Sbjct 2521164 ATCTTAGCTTTTACATTCTCTATCGTATCTGAAGCTTCAACTTCCAGGGTGATGGTCTTT 2521223 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || ||||| ||||||||||| Sbjct 2521224 CCAGTGAGTGTTTTCACGAAGATCTGCAT 2521252 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| | | | ||| |||||||||| ||| || ||||| ||||||||||| | Sbjct 2520568 TTCCTCCGCGAAGACGCAAGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTATAGTCGG 2520627 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 |||| ||| |||| || | ||||| || ||||| || | || ||||| ||| | | Sbjct 2520628 AAAGAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATCAAACGCTGCTGATCTGGAG 2520687 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || ||||| || |||||| ||| ||| |||||| || || |||| Sbjct 2520688 GAATTCCTTCCTTATCTTGAATCTTGGCTTTTACGTTCTCTATCGTATCTGAAGCTTCAA 2520747 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | ||| ||||| ||||| ||||| || ||||| ||||| ||||| Sbjct 2520748 CCTCCAAGGTGATGGTCTTTCCTGTGAGTGTTTTCACGAAGATTTGCAT 2520796 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||| | ||| ||| || || ||||| ||||| |||||| ||| | | || Sbjct 2519900 CAAGACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAAAGGGTTCTTCCGTC 2519959 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || | ||||| || ||||| || | |||||||| ||| | || | || ||||| || Sbjct 2519960 TTCTAATTGTTTACCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCCTTCCTTATC 2520019 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| || || |||||| || || ||||| || | ||| ||||| Sbjct 2520020 TTGAATCTTGGCCTTTACATTCTCTATCGTATCTGAAGCTTCAACCTCCAGGGTGATGGT 2520079 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| || ||||| || |||||||||||||| Sbjct 2520080 CTTTCCTGTCAGAGTTTTGACAAAGATCTGCAT 2520112 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || |||||||| |||||| ||| |||| |||| |||||| || ||||| Sbjct 2520378 TCCTTCTGTATATTATAGTCGGAAAGGGTTCTACCATCTTCCAACTGTTTACCAGCAAAG 2520437 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | ||| ||||| || | || | || ||||| || |||||| ||| ||| Sbjct 2520438 ATCAATCGCTGCTGATCGGGAGGAATACCTTCCTTATCTTGAATCTTGGCTTTCACGTTC 2520497 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 |||||| || || ||||| || | ||| ||||| ||||| || || || || ||| Sbjct 2520498 TCTATCGTATCTGAAGCTTCAACTTCCAGGGTGATGGTCTTTCCTGTAAGCGTTTTGACA 2520557 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 2520558 AAGATCTGCAT 2520568 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| | | | ||| ||||| || | || || ||||| || |||||||| | Sbjct 2520796 TTCCTCCGCGAAGTCGCAAGACCAAATGCAGAGTAGACTCCTTCTGTATATTATAGTCGG 2520855 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 |||| ||| |||| || | ||||| || ||||| || | || ||||| ||| | | Sbjct 2520856 AAAGAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATCAAACGCTGCTGATCTGGTG 2520915 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || ||||| || |||||| ||| ||| |||||| || || |||| Sbjct 2520916 GAATTCCTTCCTTATCTTGAATCTTGGCTTTCACGTTCTCTATCGTATCTGAAGCTTCAA 2520975 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | ||| ||||| || || || ||||| || |||||||||||||| Sbjct 2520976 CTTCCAGGGTGATGGTCTTCCCTGTCAGAGTTTTGACAAAGATCTGCAT 2521024 >seq4277 Length=1076248 Score = 100 bits (110), Expect = 2e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851 ||||||| || || || || || ||| | || |||| || | ||||||||||| || | Sbjct 1004402 CTTTCTGGATATTGTAATCGGAGAGGGTGCGACCATCTTCTAATTGTTTTCCGGCGAAAA 1004343 Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911 | || ||||||||||| | || | || |||||||| ||||| || || | Sbjct 1004342 TGAGACGTTGCTGGTCAGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATTTT 1004283 Query 34912 CTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAA 34971 | || | ||| ||||| || |||| ||| |||||||| ||||| || |||||||| | Sbjct 1004282 CGATGGTATCAGACGCCTCGACCTCGAGGGTGATGGTTTTACCCGTTAGGGTCTTCACGA 1004223 Query 34972 AGATCTGCAT 34981 | |||||||| Sbjct 1004222 ATATCTGCAT 1004213 Score = 100 bits (110), Expect = 2e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851 ||||||| || || || || || ||| | || |||| || | ||||||||||| || | Sbjct 1007245 CTTTCTGGATATTGTAATCGGAGAGGGTGCGACCATCTTCTAATTGTTTTCCGGCGAAAA 1007186 Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911 | || ||||||||||| | || | || |||||||| ||||| || || | Sbjct 1007185 TGAGACGTTGCTGGTCAGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATTTT 1007126 Query 34912 CTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAA 34971 | || | ||| ||||| || |||| ||| |||||||| ||||| || |||||||| | Sbjct 1007125 CGATGGTATCAGACGCCTCGACCTCGAGGGTGATGGTTTTACCCGTTAGGGTCTTCACGA 1007066 Query 34972 AGATCTGCAT 34981 | |||||||| Sbjct 1007065 ATATCTGCAT 1007056 >seq7268 Length=409911 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| || ||||| || ||||| ||||| | ||| |||| || |||||||| || ||||| Sbjct 284583 TTCCTTTTGAATATTGTAGTCTGAAAGCGTGCGTCCATCTTCAAGCTGTTTGCCCGCAAA 284524 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 |||| || ||||| ||| | || | || || ||||| || ||| || || | Sbjct 284523 GATTAATCTCTGCTGATCTGGGGGAATGCCTTCTTTGTCTTGGATTTTCGCCTTTAC--A 284466 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || || | || ||||||||| || | || || ||||| || ||||||||||| Sbjct 284465 TTCTCAATAGTATCGGAGGCCTCAACTTCCAATGTAATAGTTTTACCGGTGAGAGTCTTA 284406 Query 34968 ACAAAGATCTGCATA 34982 ||||| || |||||| Sbjct 284405 ACAAAAATTTGCATA 284391 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/210 (71%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 34775 CAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833 |||| |||| ||| ||| || |||||||| ||||||||||| | || |||| |||| Sbjct 286423 CAAGATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCCGAAAGTGTGCGGCCATCTTCCA 286364 Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893 ||||||| || || || || | | ||||||||| | || | ||||| || || || Sbjct 286363 GCTGTTTACCAGCGAAGATCAACCTCTGCTGGTCTGGTGGGATGCCCTCTTTATCCTGAA 286304 Query 34894 TCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 |||| || || || || || | || |||||||| || | || || || || Sbjct 286303 TCTTTGCCTTCAC--ATTCTCGATAGTATCGGAAGCCTCAACTTCTAAAGTAATAGTCTT 286246 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||||||||||||||| || ||||| Sbjct 286245 GCCAGTGAGAGTCTTCACAAAAATTTGCAT 286216 Score = 89.7 bits (98), Expect = 3e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || ||||| || ||||| ||||| | ||| |||| || |||||||||||||| || Sbjct 282302 TCCTTTTGAATATTGTAGTCAGAAAGTGTGCGTCCATCTTCAAGCTGTTTTCCGGCGAAG 282243 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | | ||||| ||| | || | || || ||||| ||| || || || | Sbjct 282242 ATCAACCTCTGCTGATCTGGTGGAATACCTTCTTTGTCTTGAATTTTTGCCTTAACATTT 282183 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||||| || | |||||| |||||||| || | ||||| || Sbjct 282182 TCAATTGTGTCTGATGCTTCAACCTCTAAGGTTATTGTTTTTCCAGTCAATGTCTTAACG 282123 Query 34971 AAGATCTGCATATT 34984 |||||||||||||| Sbjct 282122 AAGATCTGCATATT 282109 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||||||||||| || || || ||||| ||||| |||| || |||||||| || || || Sbjct 282986 TCTTTCTGAATATTGTAATCAGAAAGCGTTCGTCCATCTTCAAGCTGTTTGCCAGCGAAG 282927 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | | ||||| || | || | || || ||||| ||| ||| || ||| Sbjct 282926 ATCAACCTCTGCTGATCAGGTGGAATACCTTCTTTGTCTTGAATTTTCGCCTTCACGTTC 282867 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 |||||| ||| || ||||| || | ||||| |||||||| || || ||||| || Sbjct 282866 TCTATCGTGTCAGACGCTTCAACCTCCAGAGTTATTGTTTTTCCTGTAAGGGTCTTAACG 282807 Query 34971 AAGATCTGCAT 34981 || || ||||| Sbjct 282806 AAAATTTGCAT 282796 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| |||||||| || ||||| ||||| | | |||| || ||||| || ||||| || Sbjct 283671 TTCCTTCTGAATATTGTAGTCGGAAAGTGTGTGGCCATCTTCAAGCTGCTTCCCGGCGAA 283612 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | || || || ||| | || | ||||| || || ||| || |||||| Sbjct 283611 GATCAATCTCTGTTGTTCTGGTGGGATTCCCTCTTTATCCTGAATTTTTGACTTGACGTT 283552 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | ||| |||||| || || | |||||||||||||| || || ||||| || Sbjct 283551 CTCAATTGTATCAGAGGCCTCTACTTCCAACGTTATGGTTTTTCCGGTAAGGGTCTTAAC 283492 Query 34970 AAAGATCTGCAT 34981 ||| || ||||| Sbjct 283491 AAAAATTTGCAT 283480 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/209 (69%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 34775 CAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833 |||| |||| ||| ||| |||||||| || || || ||||| | || |||| || | Sbjct 285967 CAAGATGAAGAGTGGATTCCTTCTGAATATTGTAATCGGAAAGTGTGCGACCATCTTCAA 285908 Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893 |||||||||| || || |||| || |||||| | | || | |||||||| || | Sbjct 285907 GCTGTTTTCCCGCGAAGATTAATCTCTGCTGGATTGGGGGGATACCCTCCTTATCTTGGA 285848 Query 34894 TCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 | ||| || ||| | || | || |||||||| || | ||||| ||||||| Sbjct 285847 TTTTCGCCTTTACGTTCTCAATTGTGTCGGACGCCTCAACCTCCAGAGTTATTGTTTTTC 285788 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || ||||| || || || |||||| Sbjct 285787 CAGTAAGGGTCTTGACGAAAATTTGCATA 285759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324583752409272