Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq7268 111 1e-19 seq4730 96.9 3e-15 seq5064 93.3 3e-14 >seq7268 Length=409911 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| || | ||| || ||| ||||||||||||||||| ||||| || | || Sbjct 286889 AGTCGCAATACAAGATGGAGGGTGGATTCTTTTTGAATATTGTAGTCAGAAAGTGTGCGG 286830 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||| |||||||| || |||| || ||| ||||| | ||||| || || Sbjct 286829 CCATCTTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGAATACCTTCT 286770 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||| || || ||| | | || || || || || || |||| ||| Sbjct 286769 TTGTCTTGAATTTTAGCCTTGACATTCTCAATAGTATCGGAGGCTTCAACTTCCAGCGTT 286710 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || ||||| ||||| | || ||||||||||| |||||| Sbjct 286709 ATTGTTTTCCCCGTGAGGGTCTTTACAAAAATTTGCATC 286671 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || ||| ||||||||||||||||| ||||| || | || | || || | ||| Sbjct 283911 ATGAAGAGTGGATTCTTTTTGAATATTGTAGTCAGAAAGTGTGCGGCCATCTTCAAGCTG 283852 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||||||||| || |||| | ||| || || | |||| ||||| ||||| ||| || Sbjct 283851 CTTACCGGCGAAGATCAACCTCTGCTGGTCTGGAGGAATACCCTCTTTGTCTTGAATTTT 283792 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 |||||| | | | || || ||||| || |||| ||||| |||||||| || Sbjct 283791 CGCCTTTACATTCTCAATTGTGTCGGAGGCCTCAACTTCCAATGTAATAGTTTTTCCAGT 283732 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 | ||||| |||||||| ||||| Sbjct 283731 GAGGGTTTTAACAAAAATTTGCAT 283708 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || ||| || || ||||||||||| ||||| || | ||| | || || | ||| Sbjct 285051 ATGAAGAGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTGCGACCATCTTCAAGCTG 284992 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 |||||||| || |||| | ||| || || | |||| ||||| ||||| ||| || Sbjct 284991 TTTACCGGCGAAGATCAACCTCTGCTGGTCTGGAGGAATACCCTCTTTGTCTTGAATTTT 284932 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 | |||||| | | | || || ||||| || |||| ||||| |||||||| || Sbjct 284931 TGCCTTTACATTCTCAATTGTGTCAGAGGCCTCTACTTCCAATGTAATAGTTTTTCCAGT 284872 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 | ||||| |||||||| ||||| Sbjct 284871 AAGTGTTTTAACAAAAATTTGCAT 284848 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| || | ||| || ||| || ||||||||||||||||| || || | | Sbjct 285293 AGGCGCAATACAAGATGGAGAGTGGATTCCTTTTGAATATTGTAATCGGAGAGCGTGTGG 285234 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| |||||||| |||| || ||| || |||| ||| | || || Sbjct 285233 CCATCTTCAAGCTGCTTCCCGGCAAAGATCAATCTCTGCTGTTCCGGGGGGATCCCTTCT 285174 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || ||| ||| || ||| | | | || || ||||| || |||| ||| Sbjct 285173 TTATCCTGAATTTTTGCCTTCACATTCTCAATTGTGTCAGAGGCCTCTACTTCCAATGTA 285114 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || |||| ||| || || ||||| ||||| Sbjct 285113 ATAGTTTTACCAGTCAGAGTCTTAACGAAAATTTGCAT 285076 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 |||||| | |||||||| || | ||| | || ||| ||||||||||| ||||| || Sbjct 286215 GCCGCCACGAAGCCGCAATACAAGATGCAATGTAGACTCCTTTTGAATATTATAATCTGA 286156 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 ||| | || | || || | ||| |||||||| || |||| ||||| || || | || Sbjct 286155 AAGAGTGCGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAACCGCTGCTGGTCTGGTGG 286096 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | | ||| || || ||||| || ||| | | || || || ||||| || Sbjct 286095 GATTCTCTCTTTATCCTGGATCTTCGCCTTCACATTCTCAATAGTGTCAGAGGCCTCTAC 286036 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| ||||| || |||| ||| || || ||||| ||||| Sbjct 286035 TTCCAATGTAATAGTTTTACCAGTCAGAGTCTTAACGAAAATTTGCAT 285988 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || ||| || |||||||||||||| || || || | || | || || | ||| Sbjct 284595 ATGGAGAGTGGATTCCTTTTGAATATTGTAGTCTGAAAGCGTGCGTCCATCTTCAAGCTG 284536 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 || || ||||| || | || ||| ||||| | ||||| ||| || ||||| || || Sbjct 284535 TTTGCCCGCAAAGATTAATCTCTGCTGATCTGGGGGAATGCCTTCTTTGTCTTGGATTTT 284476 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 |||||| | | || || || ||||| || |||| ||||| ||||| || || Sbjct 284475 CGCCTTTACATTCTCAATAGTATCGGAGGCCTCAACTTCCAATGTAATAGTTTTACCGGT 284416 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 | ||| || |||||||| ||||| Sbjct 284415 GAGAGTCTTAACAAAAATTTGCAT 284392 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| || | ||| ||||| || | || | || ||| |||||||||||||| ||||| Sbjct 283479 GCCTCCACGTAGACGCAATACAAGGTGCAATGTAGACTCCTTTTGAATATTGTAGTCAGA 283420 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || | || || | ||| || || || || |||| | |||||| || | ||| Sbjct 283419 AAGTGTACGGCCATCTTCGAGCTGTTTGCCTGCGAAGATCAACCTCTGTTGGTCTGGGGG 283360 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || || || ||||| ||| || ||| ||| | | || || || ||||| || Sbjct 283359 AATACCTTCTTTGTCTTGAATTTTAGCTTTGACATTTTCTATAGTATCGGATGCCTCAAC 283300 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||| || ||||| || || | || || |||||||| ||||| Sbjct 283299 TTCCAGCGTTATTGTTTTACCTGTAAGGGTCTTAACAAAAATTTGCAT 283252 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| |||||||||||||| ||||| || | || | || || | ||| || ||||| || Sbjct 282303 CTCCTTTTGAATATTGTAGTCAGAAAGTGTGCGTCCATCTTCAAGCTGTTTTCCGGCGAA 282244 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 |||| | ||| ||||| | |||| || || ||||| ||| ||| || ||| Sbjct 282243 GATCAACCTCTGCTGATCTGGTGGAATACCTTCTTTGTCTTGAATTTTTGCCTTAACATT 282184 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | ||||| || || ||||| | || || |||||||| ||||| || || || Sbjct 282183 TTCAATTGTGTCTGATGCTTCAACCTCTAAGGTTATTGTTTTTCCAGTCAATGTCTTAAC 282124 Query 48755 AAAAATCTGCAT 48766 || |||||||| Sbjct 282123 GAAGATCTGCAT 282112 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || ||| || ||||||||||| || ||||| || | || | || || | ||| Sbjct 282771 ATGGAGAGTGGATTCCTTTTGAATATTATAGTCAGAAAGTGTGCGGCCATCTTCAAGCTG 282712 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||||| || || |||| | ||| || |||| ||||| || || ||||| ||| || Sbjct 282711 TTTACCAGCGAAGATCAACCTCTGCTGGTCCGGGGGAATACCTTCTTTGTCTTGAATTTT 282652 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 ||| ||| | | || || || ||||| || |||| ||| || ||||| || || Sbjct 282651 AGCTTTGACATTTTCAATAGTATCGGATGCCTCAACTTCCAGCGTTATTGTTTTACCTGT 282592 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 | || || |||||||| ||||| Sbjct 282591 AAGGGTCTTAACAAAAATTTGCAT 282568 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 ||||||| || | ||| || || |||||| ||||||||||||||||| || |||| Sbjct 283013 AGCCGCAGTACAAGATGCAGTGTAGACTCTTTCTGAATATTGTAATCAGAAAGCGTTCGT 282954 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||| || || || || |||| | ||| ||||| | |||| || || Sbjct 282953 CCATCTTCAAGCTGTTTGCCAGCGAAGATCAACCTCTGCTGATCAGGTGGAATACCTTCT 282894 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||| || || || | | | || ||||| || ||||||| || Sbjct 282893 TTGTCTTGAATTTTCGCCTTCACGTTCTCTATCGTGTCAGACGCTTCAACCTCCAGAGTT 282834 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| || | || || || ||||| ||||| Sbjct 282833 ATTGTTTTTCCTGTAAGGGTCTTAACGAAAATTTGCAT 282796 >seq4730 Length=3448589 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || ||| || || || || ||||| || |||||| |||| Sbjct 2521263 AGACGCAAAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGATAGAGTTCGT 2521322 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || ||||| ||||| ||||| || | || ||||| || | || | || ||| Sbjct 2521323 CCGTCTTCTAACTGTTTACCAGCAAAGATTAAACGTTGTTGTTCGGGAGGTATTCCTTCC 2521382 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || ||||| ||| || | | | || || ||||| || |||| || Sbjct 2521383 TTATCTTGTATCTTAGCTTTCACGTTTTCTATCGTGTCCGAAGCCTCAACTTCCAGGGTG 2521442 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| ||||| | ||||||||||| |||||||| Sbjct 2521443 ATGGTTTTACCCGTGAGTGTTTTTACAAAGATCTGCAT 2521480 >seq5064 Length=110883 Score = 93.3 bits (102), Expect = 3e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || |||||||| ||||| |||||||||| || |||||||| ||||||||||| || Sbjct 108514 CCACCCCTTAGACGCAAGACCAAATGTAAAGTAGATTCTTTTTGGATATTGTAATCTGAG 108573 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || ||| | | || || | ||| ||||| |||||||||| || || ||||||| ||| Sbjct 108574 AGGGTTCTACCATCTTCAAGCTGTTTACCAGCAAATATCAATCTTTGCTGATCCGGTGGA 108633 Query 48660 A 48660 | Sbjct 108634 A 108634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380879106912477