Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq4730 96.9 3e-15 seq7268 84.2 2e-11 >seq4730 Length=3448589 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || ||||| ||||| | || || || ||||| ||| ||| ||| |||| Sbjct 2521025 AATGCAGATCTTTGTCAAAACTCTGACAGGGAAGACCATCACCCTGGAAGTTGAAGCTTC 2520966 Query 28613 AGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 ||| ||| | | | | || || || | || || || || ||| | || ||||| Sbjct 2520965 AGATACGATAGAGAACGTGAAAGCCAAGATTCAA-GATAAGGAAGGAATTCCACCAGATC 2520907 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 | ||| | | |||||||| || |||||||| |||||| || |||| | |||| |||| Sbjct 2520906 AGCAGCGTTTGATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTCTTTCCGACTATA 2520847 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 | || || || || ||||||||||| |||| || || | || ||||| || Sbjct 2520846 ATATACAGAAGGAGTCTACTCTGCATTTGGTCTTGCGACTTCGCGGAGGAAT 2520795 >seq7268 Length=409911 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| |||||||| || | ||||| ||||| || || ||| ||| | || Sbjct 286672 ATGCAAATTTTTGTAAAGACCCTCACGGGGAAAACAATAACGCTGGAAGTTGAAGCCTCC 286731 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || ||||| ||||| |||||||| || | ||| |||||| Sbjct 286732 GATACTATTGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAG 286791 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGATTATA 28731 |||||| | ||||| || || ||||| | |||||| | | ||| | | || || | Sbjct 286792 CAGAGATTGATCTTCGCCGGTAAACAGCTCGAAGATGGCCGCACACTTT--CTGACTACA 286849 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 | |||||||||||||| || || || | ||||| || | || ||||| || Sbjct 286850 ATATTCAAAAAGAATCCACCCTCCATCTTGTATTGCGACTCCGTGGAGGCAT 286901 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || | || |||||||| ||||| ||| || | || Sbjct 284392 ATGCAAATTTTTGTTAAGACTCTCACCGGTAAAACTATTACATTGGAAGTTGAGGCCTCC 284451 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| |||||| |||||||| || | ||| |||||| Sbjct 284452 GATACTATTGAGAATGTAAAGGCGAAAATCCAAGACAAAGAAGGCATTCCCCCAGATCAG 284511 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | ||||||||||||||||| | |||||| || | | || || || Sbjct 284512 CAGAGATTAATCTTTGCGGGCAAACAGCTTGAAGATGGACGCACGCTTTCAGACTACAAT 284571 Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756 |||||||| ||||| ||||| || Sbjct 284572 ATTCAAAAGGAATCCACTCTCCA 284594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425339478960021