Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_021190.1 Length=46150 Score E Sequences producing significant alignments: (Bits) Value seq3527 145 2e-30 >seq3527 Length=1401 Score = 145 bits (160), Expect = 2e-30 Identities = 435/663 (66%), Gaps = 14/663 (2%) Strand=Plus/Plus Query 11126 GAGTTGCTGCGCATGAAGGCGGCGCAGGTTGGTGCAAGCGATGCGGCTGAGGTCTATATC 11185 ||| ||||||| | ||||| || || | || | |||||||| || || |||| | Sbjct 449 GAGATGCTGCGTTTTAAGGCCGCTCAACTGGGCGTCAGCGATGCCGCCGATATCTACCTG 508 Query 11186 CGCAAGCTCGAGGCTGCCAAAGTGGCCACGCACGGTCTGGGCCTGAAAAGTGCCGCAGCG 11245 |||||||| | || || ||| | || | ||||||||| | |||||| Sbjct 509 CGCAAGCTGGCCGCAGCGGGGAATGCCTCCCATCACTTCAGCCTGAAAACCACGGCAGCG 568 Query 11246 CGGCAGGAACTGGGGATACTGATCGGCGAGGTCATGCGCGGTAACTTCGGTGCACTGCGC 11305 || | ||| ||||| | || | ||||| | | | || | | || | || || Sbjct 569 CGCCGGGAGCTGGGCGTGATGCTGGGCGAATTGGCGAGAGGCGATCTGGGCTCCCTTCGT 628 Query 11306 GGCTCCGGGATCACGCTGGCGAACCGGGCAGGATGGATAGACCAGCTGCTGTCGCTGCGC 11365 |||||||| ||||| ||||| || || | || ||| || ||||| || | ||||| Sbjct 629 GGCTCCGGTATCACCCTGGCAAATCGTTCCGGCCTGATTGAACAGCTCATGACCCTGCGG 688 Query 11366 GGGCTTGGGATCGCCGGCATGGTTGGTGGTATTGCCGCGGCGGTTTACGGGCTGGGTAAA 11425 || |||| ||| |||| || | || |||||||||| ||| | || || ||||| ||| Sbjct 689 GGACTTGCGATAACCGGGGTGATCGGCGGTATTGCCGGTGCGCTCTATGGCCTGGGCAAA 748 Query 11426 GCCTGGTATGACGGCAGCAAAGAGTCCGAGGAATTTAACAGGCAGCTGATCCTGACCGGG 11485 ||||||||| | || | || | | ||||| || | |||| ||||||| || || Sbjct 749 GCCTGGTATCAGGGTTCACAGGAAGCGGTTGAATTCAATAAGCAGATGATCCTCACGGGT 808 Query 11486 AATTACGCCGGGAAAACGTCCGGACAGCTACAGGCACTGGCGCGCTCACTGGCAGGTAAT 11545 | | ||||| |||||| ||| |||| ||| |||| || ||| | || || Sbjct 809 CACCATGCCGGTAAAACGGCCGCCGAGCTGCAGCTGATGGCAAAATCCCTGTCCGGCAAC 868 Query 11546 GGCATCACACAGCAT-GC--TGCTGCAGGTGTGCTGGCGCAGGTTGTCGGAAGTGGTGC- 11601 || | ||||||||| || ||||| | ||||||| | || || || || || Sbjct 869 GGGGTAACACAGCATAGCCTTGCTGAA---ACGCTGGCGAAAGTGGTGGG--GTCAGGCA 923 Query 11602 GTTTAGC-GGTAATGATGTCAGCATGGTGAGCAATGTTGCTGCCAGGCTGCAGCAGGCAA 11660 |||| | | || | || ||||| | | || || || | ||| | || | | Sbjct 924 GTTTCTCAAGCAACGCCATCGGCATGATCGCCGATACCGCCGCTAAGCT--AAAAGCCCA 981 Query 11661 --CCGGGCAGGCCGTCGACGAAACCATCAACCAGTTTAAACGCCTGAAGGATGATCCGGT 11718 ||||||| | || || ||||||||||| |||||||||||| | || |||||||| Sbjct 982 TGTCGGGCAGTCGGTTGATGAAACCATCAATCAGTTTAAACGCTTTCAGACGGATCCGGT 1041 Query 11719 TAATGCAGTCACAACGCTCAACGATTCGCTGCATTTTCTGACGGCCACGCAGTATGAACA 11778 | || || || ||| | | ||||||||||||||||| || || || ||| || Sbjct 1042 GCAGGCCGTTACCGAGCTGGATAAATCGCTGCATTTTCTGACCGCGACACAACTTGAGCA 1101 Query 11779 GAT 11781 ||| Sbjct 1102 GAT 1104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147536323326656