Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq4147 105 1e-16 seq4970 87.8 3e-11 >seq4147 Length=376802 Score = 105 bits (116), Expect = 1e-16 Identities = 168/241 (70%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| |||||||| |||||||| || || ||| ||||| | |||||||| || | | Sbjct 149278 TGTATTTGGTGACTGCCTTGGTGCCTTCGCTGACAGCGTGTTTCGCCAGTTCCCCAGGAA 149219 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | || || |||||||| || |||| || || ||||||||| Sbjct 149218 GAAGAAGCCTGACTGCCGTCTGGATTTCCCGGGAAGTTATGGTAGAGCGCTTGTTGTAAT 149159 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| | ||||||| ||||||| || | || ||||| ||||| ||||| Sbjct 149158 GCGCCAACCTCGATGCCTCGGCAGCGATGCGTTCAAACACATCGTTCACAAAGCTGTTCA 149099 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| | ||||| || |||||| || || |||||||||||||||| Sbjct 149098 TGATGCTCATAGCTTTGCTAGAGATTCCGGTGTCGGGATGGACTTGCTTGAGCACCTTGT 149039 Query 1485710 A 1485710 | Sbjct 149038 A 149038 >seq4970 Length=98340 Score = 87.8 bits (96), Expect = 3e-11 Identities = 116/159 (73%), Gaps = 3/159 (2%) Strand=Plus/Plus Query 794361 TTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACA 794420 |||||||||||| ||||| |||||||| || | ||||| | ||||||||| || Sbjct 65762 TTCGTTGCTAAATGTAAGGCCAGGCATGAGACCTCTTTTCTTCAACCAAAAGATAGCGGC 65821 Query 794421 GAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAA 794480 |||||| || |||||| ||||| || || || ||||| |||| | || |||| || Sbjct 65822 GAAACTACCGCTGAAAAATATGCCTTCCACCGCAGCAAATGCGACTATTCGTTCGGGGAA 65881 Query 794481 AGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 |||| ||| ||| | ||| ||||| |||| ||||| Sbjct 65882 AGTG-GCAG--ACTCGTGGTTTATCCAATTCAATGCCCA 65917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914906186905961