Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq7268 105 1e-17 seq4730 102 1e-16 seq5064 96.9 5e-15 >seq7268 Length=409911 Score = 105 bits (116), Expect = 1e-17 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || |||| || | || || |||||||| || | || || ||| || Sbjct 286673 TGCAAATTTTTGTAAAGACCCTCACGGGGAAAACAATAACGCTGGAAGTTGAAGCCTCCG 286732 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| || |||||| ||| |||||||| ||||| || ||||| | Sbjct 286733 ATACTATTGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAGC 286792 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||| | || || || |||||||| | || ||| | || | | || || |||| Sbjct 286793 AGAGATTGATCTTCGCCGGTAAACAGCTCGAAGATGGCCGCACACTTTCTGACTACAATA 286852 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| || ||||| | ||||| ||| | | ||||| Sbjct 286853 TTCAAAAAGAATCCACCCTCCATCTTGTATTGCGACTCCGTGGAGG 286898 Score = 102 bits (112), Expect = 1e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || || ||||| ||||| | || || || || Sbjct 284393 TGCAAATTTTTGTTAAGACTCTCACCGGTAAAACTATTACATTGGAAGTTGAGGCCTCCG 284452 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | |||||||| ||||| ||| |||||||||||||| || ||||| | Sbjct 284453 ATACTATTGAGAATGTAAAGGCGAAAATCCAAGACAAAGAAGGCATTCCCCCAGATCAGC 284512 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||| | || ||||| || ||||| | || ||| | ||| | |||| || |||| Sbjct 284513 AGAGATTAATCTTTGCGGGCAAACAGCTTGAAGATGGACGCACGCTTTCAGACTACAATA 284572 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA 146240 | ||||| ||||| ||| ||||| | ||| Sbjct 284573 TTCAAAAGGAATCCACTCTCCATCTTGTA 284601 Score = 102 bits (112), Expect = 1e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || | |||||||||||||| ||| | || || || || Sbjct 284621 TGCAAATTTTCGTCAAGACCCTTACAGGAAAAACAATAACTCTGGAGGTCGAGGCCTCCG 284680 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | || || || ||||| ||| |||||||| |||||||| ||||| | Sbjct 284681 ACACAATTGAGAACGTGAAGGCGAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAGC 284740 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | || ||||| |||||||| | || ||| | ||| | |||| || |||| Sbjct 284741 AGAGGTTGATCTTTGCCGGTAAACAGCTTGAAGATGGACGCACGCTTTCAGACTACAATA 284800 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA 146240 | ||||| ||||| ||| ||||| | ||| Sbjct 284801 TTCAAAAGGAATCCACTCTCCATCTTGTA 284829 Score = 84.2 bits (92), Expect = 3e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 |||| || ||| | || ||||| || ||||||||||| || | || || ||| ||| | Sbjct 282113 TGCAGATCTTCGTTAAGACATTGACTGGAAAAACAATAACCTTAGAGGTTGAAGCATCA- 282171 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| ||||||| || ||||| ||| |||||||| |||||||| ||||| Sbjct 282172 GACACAATTGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAG 282231 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || || | || || || || ||||| | || ||| | || | | || || ||| Sbjct 282232 CAGAGGTTGATCTTCGCCGGAAAACAGCTTGAAGATGGACGCACACTTTCTGACTACAAT 282291 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTA 146240 || ||||| || || || | ||| | ||| Sbjct 282292 ATTCAAAAGGAGTCTACACTGCATCTTGTA 282321 Score = 84.2 bits (92), Expect = 3e-11 Identities = 154/226 (68%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || | |||||||||||||| ||| | || || ||| | Sbjct 282797 TGCAAATTTTCGTTAAGACCCTTACAGGAAAAACAATAACTCTGGAGGTTGAAGCGTCTG 282856 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | || || || ||||| ||| |||||||| |||||||| ||||| | Sbjct 282857 ACACGATAGAGAACGTGAAGGCGAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAGC 282916 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | || || || || ||||| | || ||| ||||| | | ||||| |||| Sbjct 282917 AGAGGTTGATCTTCGCTGGCAAACAGCTTGAAGATGGACGAACGCTTTCTGATTACAATA 282976 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || ||||| || || | ||| | ||| | || | ||||||| Sbjct 282977 TTCAGAAAGAGTCTACACTGCATCTTGTACTGCGGCTTCGAGGAGG 283022 Score = 84.2 bits (92), Expect = 3e-11 Identities = 149/215 (69%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| ||| | || || | |||||||||||||| ||| | || || ||| | | | Sbjct 283025 TGCAAATTTTCGTTAAGACCCTTACAGGAAAAACAATAACTCTGGAGGTTGAAGCGTCA- 283083 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| ||||||| || ||||| ||| |||||||| |||||||| ||||| Sbjct 283084 GACACAATTGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAG 283143 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || || | || || || || ||||| | || ||| | || | | || || ||| Sbjct 283144 CAGAGGTTGATCTTCGCGGGCAAACAGCTCGAAGATGGCCGCACACTTTCTGACTACAAT 283203 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 || ||||| || || || | || | ||||| || Sbjct 283204 ATTCAAAAGGAGTCAACATTGCACCTTGTATTGCG 283238 >seq4730 Length=3448589 Score = 102 bits (112), Expect = 1e-16 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | |||||| | |||||||| || || || | || || ||| | | Sbjct 2520795 TGCAAATCTTCGTGAAAACACTCACAGGAAAGACCATCACCTTGGAGGTTGAAGCTTCAG 2520736 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | || |||||| || || ||| ||| ||||| ||||| || ||||| | Sbjct 2520735 ATACGATAGAGAACGTAAAAGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGC 2520676 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | || ||||| |||||||||||||| ||| |||||| | | || ||||| | Sbjct 2520675 AGCGTTTGATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTCTTTCCGACTATAACA 2520616 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | || || || || ||| | || || || || || Sbjct 2520615 TCCAGAAGGAGTCCACTCTTCACTTGGTCTTGCG 2520582 Score = 102 bits (112), Expect = 1e-16 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| | ||||| || || || || | || || ||| | | Sbjct 2521023 TGCAGATCTTTGTCAAAACTCTGACAGGGAAGACCATCACCCTGGAAGTTGAAGCTTCAG 2520964 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | || || ||| || || ||| ||| ||||| |||||||| ||||| | Sbjct 2520963 ATACGATAGAGAACGTGAAAGCCAAGATTCAAGATAAGGAAGGAATTCCACCAGATCAGC 2520904 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | || ||||| |||||||||||||| ||| |||||| | | || ||||||| Sbjct 2520903 AGCGTTTGATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTCTTTCCGACTATAATA 2520844 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 |||| || || || ||| | ||||| || || ||| | | ||||| Sbjct 2520843 TACAGAAGGAGTCTACTCTGCATTTGGTCTTGCGACTTCGCGGAGG 2520798 Score = 100 bits (110), Expect = 4e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| | |||||||| || || || | || || ||| | | Sbjct 2520567 TGCAGATCTTTGTCAAAACGCTTACAGGAAAGACCATCACCCTGGAAGTTGAAGCTTCAG 2520508 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | || || ||| || || ||| ||| ||||| ||||| |||||||| | Sbjct 2520507 ATACGATAGAGAACGTGAAAGCCAAGATTCAAGATAAGGAAGGTATTCCTCCCGATCAGC 2520448 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | || ||||| |||||||| || || ||| |||||| | | || ||||||| Sbjct 2520447 AGCGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGTAGAACCCTTTCCGACTATAATA 2520388 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 |||| || || || ||| | ||||| || || ||| Sbjct 2520387 TACAGAAGGAGTCTACTCTGCATTTGGTCTTGCGA 2520353 Score = 98.7 bits (108), Expect = 2e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | |||||| | |||||||| || || || | || || ||| | | Sbjct 2520339 TGCAAATCTTCGTGAAAACACTCACAGGAAAGACCATCACCCTGGAGGTTGAAGCTTCAG 2520280 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | || || ||| || || ||| ||| ||||| ||||| || ||||| | Sbjct 2520279 ATACGATAGAGAACGTGAAAGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGC 2520220 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | || ||||| |||||||||||||| || ||||| | | || ||||||| Sbjct 2520219 AGCGTTTGATCTTTGCTGGTAAACAATTAGAAGACGGAAGAACACTTTCCGACTATAATA 2520160 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 |||| || || || ||| | || || || || || Sbjct 2520159 TACAGAAGGAGTCCACTCTTCACTTGGTCTTGCG 2520126 Score = 89.7 bits (98), Expect = 8e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| | |||||||| || || || | || || ||| | | Sbjct 2520111 TGCAGATCTTTGTCAAAACTCTGACAGGAAAGACCATCACCCTGGAGGTTGAAGCTTCAG 2520052 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | |||||||| || || ||| ||| ||||| ||||| || ||||| | Sbjct 2520051 ATACGATAGAGAATGTAAAGGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGC 2519992 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| |||||||||||||| || ||||| | | || || || | Sbjct 2519991 AACGTTTGATCTTTGCTGGTAAACAATTAGAAGACGGAAGAACCCTTTCTGACTACAACA 2519932 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||| ||||| || |||| || || || || Sbjct 2519931 TCCAAAAGGAATCCACCCTCCACTTGGTCTTGCG 2519898 >seq5064 Length=110883 Score = 96.9 bits (106), Expect = 5e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 146132 AGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAG 146191 ||| |||||||| ||||| |||||| | || ||||| |||||||| | || ||| ||| Sbjct 108639 AGGTATTCCACCGGATCAGCAAAGATTGATATTTGCTGGTAAACAGCTTGAAGATGGTAG 108580 Query 146192 AACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAG 146251 ||| | ||||||| ||||| ||||||||||| ||| | ||||| || || || |||| Sbjct 108579 AACCCTCTCAGATTACAATATCCAAAAAGAATCTACTTTACATTTGGTCTTGCGTCTAAG 108520 Query 146252 AGGAGG 146257 || || Sbjct 108519 GGGTGG 108514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786042588619080