Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq7268 125 6e-24 seq11430 91.5 1e-13 >seq7268 Length=409911 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | |||||||| || | || || ||| | || ||| | ||||| |||||| | Sbjct 286672 ATGCAAATTTTTGTAAAGACCCTCACGGGGAAAACAATAACGCTGGAAGTTGAAGCCTCC 286731 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| ||| | || || |||||| || ||||| ||||| || || |||||| Sbjct 286732 GATACTATTGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAG 286791 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||| | || | || ||| ||||| |||||||||| | | | || |||||| Sbjct 286792 CAGAGATTGATCTTCGCCGGTAAACAGCTCGAAGATGGCCGCACACTTTCTGACTACAAT 286851 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 |||||||||||||||||| | ||| | || || Sbjct 286852 ATTCAAAAAGAATCCACCCTCCATCTTGTATT 286883 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | ||||| |||||| | || |||||| | || || | ||||| || ||| Sbjct 284847 CATGCAAATTTTTGTTAAAACACTTACTGGAAAAACTATTACATTGGAAGTAGAGGCCTC 284906 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || ||| | ||||| ||||||| || ||||||||||| || || || || Sbjct 284907 TGACACAATTGAGAATGTAAAGGCAAAAATTCAAGACAAAGAGGGTATTCCTCCAGACCA 284966 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||| || | || | || ||| ||||| || ||||||| | | | | || ||||| Sbjct 284967 GCAGAGGTTGATCTTCGCCGGTAAACAGCTTGAAGATGGTCGCACACTTTCTGACTACAA 285026 Query 25354 TATTCAAAAAGAATCCACCATTCAT 25378 |||||| || |||||||| ||||| Sbjct 285027 TATTCAGAAGGAATCCACTCTTCAT 285051 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | ||||| ||||| | || |||||| | || || | ||||| || ||| Sbjct 283707 CATGCAAATTTTTGTTAAAACCCTCACTGGAAAAACTATTACATTGGAAGTTGAGGCCTC 283766 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||| || || ||| | ||||| |||||| || ||||||||||| || || || || Sbjct 283767 CGACACAATTGAGAATGTAAAGGCGAAAATTCAAGACAAAGAGGGTATTCCTCCAGACCA 283826 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||| || | || | || ||| || || || ||||||| | | | || ||||| Sbjct 283827 GCAGAGGTTGATCTTCGCCGGTAAGCAGCTTGAAGATGGCCGCACACTTTCTGACTACAA 283886 Query 25354 TATTCAAAAAGAATCCACCATTCAT 25378 |||||||||||||||||| ||||| Sbjct 283887 TATTCAAAAAGAATCCACTCTTCAT 283911 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || | ||||| ||| | || || | ||||| || ||| | Sbjct 284392 ATGCAAATTTTTGTTAAGACTCTCACCGGTAAAACTATTACATTGGAAGTTGAGGCCTCC 284451 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| ||| | ||||| ||||| || ||||| || || || || |||||| Sbjct 284452 GATACTATTGAGAATGTAAAGGCGAAAATCCAAGACAAAGAAGGCATTCCCCCAGATCAG 284511 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352 || ||| | || | | |||||||| || ||||||| | | | |||| | |||| Sbjct 284512 CAGAGATTAATCTTTGCGGGCAAACAGCTTGAAGATGGACGCACGCTTTCAG--ACTACA 284569 Query 25353 ATATTCAAAAAGAATCCAC 25371 |||||||||| |||||||| Sbjct 284570 ATATTCAAAAGGAATCCAC 284588 Score = 95.1 bits (104), Expect = 1e-14 Identities = 143/200 (72%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | ||||| || || | ||||||||| | || ||| | ||||| || ||| Sbjct 283479 CATGCAAATTTTTGTTAAGACCCTTACCGGAAAAACCATAACGTTGGAAGTAGAGGCCTC 283538 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||||| || ||| | || || ||||||| ||||||||||| || || || || || Sbjct 283539 TGATACAATTGAGAACGTCAAGTCAAAAATTCAGGATAAAGAGGGAATCCCACCAGAACA 283598 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT-GATAGA-AATGTCAGCGATTAC 25351 || ||| | || | || ||| || || || |||||| | | | | | || ||| ||| Sbjct 283599 ACAGAGATTGATCTTCGCCGGGAAGCAGCTTGAAGATGGCCACACACTTTC--CGACTAC 283656 Query 25352 AATATTCAAAAAGAATCCAC 25371 |||||||| || ||||| || Sbjct 283657 AATATTCAGAAGGAATCTAC 283676 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | ||||| || || | || || ||| | || ||| | ||||| || || Sbjct 282567 CATGCAAATTTTTGTTAAGACCCTTACAGGTAAAACAATAACGCTGGAAGTTGAGGCATC 282626 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||||||||| || | || ||| |||||| || ||||| ||||| || || || || Sbjct 282627 CGATACTATTGAAAATGTCAAAGCTAAAATTCAAGACAAAGAAGGTATTCCCCCGGACCA 282686 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||| || | || | || || ||||| || ||||||| | | | || || || Sbjct 282687 GCAGAGGTTGATCTTCGCTGGTAAACAGCTTGAAGATGGCCGCACACTTTCTGACTATAA 282746 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||||||| |||||||| | ||| | || | ||| | ||||||| Sbjct 282747 TATTCAAAAGGAATCCACTCTCCATCTTGTACTGAGACTTCGAGGAGG 282794 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | ||||| || || | || || || | || || | ||||| || || Sbjct 286215 CATGCAAATTTTTGTGAAGACTCTCACTGGCAAGACTATTACTTTAGAAGTTGAGGCTTC 286274 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||||||||||||| | || || ||| ||| ||||||||||| || || || || || Sbjct 286275 CGATACTATCGAGAATGTGAAGGCAAAGATTCAGGATAAAGAGGGCATCCCACCAGACCA 286334 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||| || | || | || || ||||| || ||||||| | | | || ||||| Sbjct 286335 GCAGAGGTTGATCTTCGCTGGTAAACAGCTGGAAGATGGCCGCACACTTTCGGACTACAA 286394 Query 25354 TATTCAAAAAGAATCCACCATTCAT 25378 |||||||| |||||||| ||||| Sbjct 286395 CATTCAAAAGGAATCCACTCTTCAT 286419 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || | || |||||| | || || | || ||||| ||| | Sbjct 284620 ATGCAAATTTTCGTCAAGACCCTTACAGGAAAAACAATAACTCTGGAGGTCGAGGCCTCC 284679 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || ||| | || || |||||| || ||||| ||||| || || |||||| Sbjct 284680 GACACAATTGAGAACGTGAAGGCGAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAG 284739 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352 || || | || | | ||| ||||| || ||||||| | | | |||| | |||| Sbjct 284740 CAGAGGTTGATCTTTGCCGGTAAACAGCTTGAAGATGGACGCACGCTTTCAG--ACTACA 284797 Query 25353 ATATTCAAAAAGAATCCAC 25371 |||||||||| |||||||| Sbjct 284798 ATATTCAAAAGGAATCCAC 284816 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || | || |||||| | || || | || || || || | Sbjct 285760 ATGCAAATTTTCGTCAAGACCCTTACTGGAAAAACAATAACTCTGGAGGTTGAGGCGTCC 285819 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATC-A 25293 || || || ||| | ||||| ||||| ||||| |||||||| || ||| ||| | Sbjct 285820 GACACAATTGAGAACGTAAAGGCGAAAATCCAAGATAAGGAGGGTATCCC-CCCAATCCA 285878 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||| ||| | || | || || ||||| || ||||||| | | | | ||||||||| Sbjct 285879 GCAGAGATTAATCTTCGCGGGAAAACAGCTTGAAGATGGTCGCACACTTTCCGATTACAA 285938 Query 25354 TATTCAAAAAGAATCCACCATTCAT 25378 |||||| || |||||||| ||||| Sbjct 285939 TATTCAGAAGGAATCCACTCTTCAT 285963 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | ||||| || || | || || ||| | || ||| | ||||| || || Sbjct 283251 CATGCAAATTTTTGTTAAGACCCTTACAGGTAAAACAATAACGCTGGAAGTTGAGGCATC 283310 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||||||||| || | || ||| |||||| || ||||| ||||| || || || || Sbjct 283311 CGATACTATAGAAAATGTCAAAGCTAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCA 283370 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 || || | || | || |||||||| |||||||||| | | | || ||||| Sbjct 283371 ACAGAGGTTGATCTTCGCAGGCAAACAGCTCGAAGATGGCCGTACACTTTCTGACTACAA 283430 Query 25354 TATTCAAAAAGAATCCAC 25371 ||||||||| || || || Sbjct 283431 TATTCAAAAGGAGTCTAC 283448 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || | || ||||| | || || | ||||| || ||| | Sbjct 285304 ATGCAAATTTTTGTTAAGACTCTTACTGGAAAGACTATTACTTTAGAAGTTGAGGCCTCC 285363 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || ||| | ||||| ||||| ||||| || ||||| || || ||| Sbjct 285364 GACACAATTGAGAACGTAAAGGCGAAAATCCAAGATAAGGAAGGTATCCCTCCAATCCAG 285423 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||| | || | || ||| ||||| || ||||||| | | | | || |||||| Sbjct 285424 CAAAGGTTAATCTTCGCCGGTAAACAGCTTGAAGATGGTCGCACACTTTCTGACTACAAT 285483 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTG 25384 ||||| || ||||||||| | ||| | ||| Sbjct 285484 ATTCAGAAGGAATCCACCCTCCATCTTGTG 285513 >seq11430 Length=555723 Score = 91.5 bits (100), Expect = 1e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 136979 GATTTACTACTTGATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACG 137038 |||| || ||||| |||| || || || |||| | ||| || | ||||||||| | | Sbjct 42130 GATTCACGACTTGGAATTCTCCGGAGAGTACTCGCCTTACATATATGTTACTAGTGTAAG 42189 Query 137039 GCTCGAACGATTCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGA 137098 |||||| ||| || ||||| || ||||| || ||||||| ||||||||||| |||| Sbjct 42190 GCTCGATCGACTCATTGTTTCCTAAAATTTGCGCAGTCGAAGCTGTCGGCATAGGCGCGA 42249 Query 137099 TCAACAATGAATT 137111 |||| | ||||| Sbjct 42250 TCAATAGAGAATT 42262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445024303195680