Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq4970 82.4 1e-10 >seq4970 Length=98340 Score = 82.4 bits (90), Expect = 1e-10 Identities = 152/223 (68%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCT 122737 ||||||||| ||||| ||||| || || || || ||||||||||| | |||| Sbjct 65743 CCTCATCTCTAGAAATGAGTTCGTTGCTAAATGTAAGGCCAGGCATGAGACCTCTTTTCT 65802 Query 122738 TCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACG 122797 |||||||| | |||||| ||| ||| ||| || || || ||||| ||||| | Sbjct 65803 TCAACCAAAAGATAGCGGCGAAACTACCGCTGAAAAATATGCCTTCCACCGCAGCAAATG 65862 Query 122798 CAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTGCCCATTTCG 122857 | | | ||||||| ||| | | ||||| | | ||| |||| |||||| || | Sbjct 65863 CGACTATTCGTTCGGGGAAAGTGGCAGACTCGTGGTTTATCCAATTCAATGCCCAGTTAG 65922 Query 122858 CCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAA 122900 | ||||| ||| || || | | ||| ||| || | |||||| Sbjct 65923 CTTTCTTAGCAACGCACGGCAGATTTTCGATTGCGTTAAATAA 65965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627933092810400