Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq4507 86.0 6e-12 >seq4507 Length=49670 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34219 ATTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTG 34278 |||||| | ||||| || ||||| |||| ||||| || || |||||||||||||| || Sbjct 13878 ATTTCCATTACTGACCACAAAACGAGTGTTTTGGAAAGGAGTAGTCGAGGAGCTGCTATG 13937 Query 34279 GTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGA 34338 ||| | | || | |||||| | || || |||||||| ||| | | || ||||| Sbjct 13938 GTTTATAAAAGGATCAACGAACGCGAAAGAACTCTCGTCGAAAGGGATTCATATATGGGA 13997 Query 34339 CGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGA 34398 | || | || || || ||||| || | || || | | || || || || Sbjct 13998 TGGAAACAGCTCACGGGAATTTCTAGATTCACATGGATTTAACGATAGAGAAGAAGGAGA 14057 Query 34399 CTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATC 34448 ||| || || |||||||| || || ||||| |||| ||| || | |||| Sbjct 14058 CTTAGGACCTGTCTACGGATTTCAATGGAGGCACTATGGAGCAAAATATC 14107 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 6897 GATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCT 6956 |||| | || ||| |||| ||||| || || |||||||| || || ||||| || || | Sbjct 14107 GATATTTTGCTCCATAGTGCCTCCATTGAAATCCGTAGACAGGTCCTAAGTCTCCTTCTT 14048 Query 6957 CCCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCT 7016 | | | || || | || ||||| || || || | || | ||||| || | Sbjct 14047 CTCTATCGTTAAATCCATGTGAATCTAGAAATTCCCGTGAGCTGTTTCCATCCCATATAT 13988 Query 7017 TCACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCT 7076 | ||| |||||||| || || | |||||| | || | | ||||| ||||||| Sbjct 13987 GAATCCCTTTCGACGAGAGTTCTTTCGCGTTCGTTGATCCTTTTATAAACCATAGCAGCT 13928 Query 7077 CCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAAAT 7126 ||||||| || || ||||| |||| ||||| || ||||| | |||||| Sbjct 13927 CCTCGACTACTCCTTTCCAAAACACTCGTTTTGTGGTCAGTAATGGAAAT 13878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448191804275280