Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq7268 82.4 5e-11 >seq7268 Length=409911 Score = 82.4 bits (90), Expect = 5e-11 Identities = 158/233 (68%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || || || |||||||| ||| || || | || ||||| | || Sbjct 282340 ATGCAAATTTTCGTCAAGACCCTTACTGGAAAAACAATAACTCTGGAGGTCGAGGCCTCC 282399 Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 ||| ||||| | || || ||||| |||||||||||| |||| | Sbjct 282400 GAC-----ACAATTGAGAACGTGAAGGCGAAAATTCAAGACAAAGAAGGTATTCCACCAG 282454 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | ||||| |||| || |||||||| ||||| | || || | |||| | || || | Sbjct 282455 ATCAGCAGAGGTTGATCTTTGCCGGTAAACAGCTCGAAGATGGCCGCACACTTTCTGACT 282514 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 |||| || ||||| ||| || ||||| | || |||||| | ||||| ||| Sbjct 282515 ACAATATTCAAAAGGAGTCTACATTGCACCTTGTATTGCGTCTTCGTGGTGGC 282567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355807757217273