Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq7268 136 3e-27 >seq7268 Length=409911 Score = 136 bits (150), Expect = 3e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||||||||| ||||| || |||||||| || ||||| || ||||| | | Sbjct 283024 ATGCAAATTTTCGTTAAGACCCTTACAGGAAAAACAATAACTCTGGAGGTTGAAGCGTCA 283083 Query 23671 GACACTGTTG-AAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| ||| |||| |||| | ||||||| |||||||||||| | || |||||||| Sbjct 283084 GACACAATTGAAAATGTTAAGGC-AAAAATTCAAGACAAAGAAGGTATTCCACCAGATCA 283142 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || |||||||| || ||||| | ||||| | || ||||| Sbjct 283143 GCAGAGGTTGATCTTCGCGGGCAAACAGCTCGAAGATGGCCGCACACTTTCTGACTACAA 283202 Query 23790 CATACAAAAAGAGTCCACATTACA 23813 || ||||| ||||| ||||| || Sbjct 283203 TATTCAAAAGGAGTCAACATTGCA 283226 Score = 125 bits (138), Expect = 5e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || ||||||||||| ||||| || || || |||||||| || | Sbjct 286672 ATGCAAATTTTTGTAAAGACCCTCACGGGGAAAACAATAACGCTGGAAGTTGAAGCCTCC 286731 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| | || | |||||| |||||||||||| | || |||||||| Sbjct 286732 GATACTATTGAGAATGTCAAGGC-TAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCA 286790 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || ||||| ||||| || ||||| | ||||| | || ||||| Sbjct 286791 GCAGAGATTGATCTTCGCCGGTAAACAGCTCGAAGATGGCCGCACACTTTCTGACTACAA 286850 Query 23790 CATACAAAAAGAGTCCAC 23807 || |||||||| ||||| Sbjct 286851 TATTCAAAAAGAATCCAC 286868 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| || ||||| || |||||||| || ||||| || || || || | Sbjct 282340 ATGCAAATTTTCGTCAAGACCCTTACTGGAAAAACAATAACTCTGGAGGTCGAGGCCTCC 282399 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || |||||| |||||||||||| | || |||||||| Sbjct 282400 GACACAATTGAGAACGTGAAGGCGAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAG 282459 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || |||||||| ||||| || ||||| | ||||| | || ||||| Sbjct 282460 CAGAGGTTGATCTTTGCCGGTAAACAGCTCGAAGATGGCCGCACACTTTCTGACTACAAT 282519 Query 23791 ATACAAAAAGAGTCCACATTACA 23813 || ||||| ||||| ||||| || Sbjct 282520 ATTCAAAAGGAGTCTACATTGCA 282542 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||||||||| ||||| || |||||||| || ||||| || ||||| | | Sbjct 282796 ATGCAAATTTTCGTTAAGACCCTTACAGGAAAAACAATAACTCTGGAGGTTGAAGCGTCT 282855 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || |||||| |||||||||||| | || || ||||| Sbjct 282856 GACACGATAGAGAACGTGAAGGCGAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAG 282915 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || || || |||||||| || ||||| | ||| || | |||||||| Sbjct 282916 CAGAGGTTGATCTTCGCTGGCAAACAGCTTGAAGATGGACGAACGCTTTCTGATTACAAT 282975 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || |||||||| ||| | ||| | || | || | |||||||| Sbjct 282976 ATTCAGAAAGAGTCTACACTGCATCTTGTACTGCGGCTTCGAGGAGG 283022 Score = 122 bits (134), Expect = 6e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| || ||||| || |||||||| || ||||| || || || || | Sbjct 284620 ATGCAAATTTTCGTCAAGACCCTTACAGGAAAAACAATAACTCTGGAGGTCGAGGCCTCC 284679 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || |||||| |||||||||||| | || |||||||| Sbjct 284680 GACACAATTGAGAACGTGAAGGCGAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAG 284739 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || |||||||| ||||| || ||||| | |||||| | || ||||| Sbjct 284740 CAGAGGTTGATCTTTGCCGGTAAACAGCTTGAAGATGGACGCACGCTTTCAGACTACAAT 284799 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| || ||||| Sbjct 284800 ATTCAAAAGGAATCCAC 284816 Score = 120 bits (132), Expect = 2e-22 Identities = 153/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| |||||||| || | || |||||||| || || | || ||||| | Sbjct 282109 AATATGCAGATCTTCGTTAAGACATTGACTGGAAAAACAATAACCTTAGAGGTTGAAGCA 282168 Query 23668 ACGGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| |||||| | |||| |||||| || |||||||||||| | || ||||| Sbjct 282169 TCAGACACAATTGAAAATGTTAAGGCAAAAA-TTCAAGACAAAGAAGGTATTCCACCAGA 282227 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||| ||| | || || || ||||| ||||| || ||||| | |||||| | || || Sbjct 282228 TCAGCAGAGGTTGATCTTCGCCGGAAAACAGCTTGAAGATGGACGCACACTTTCTGACTA 282287 Query 23787 CAACATACAAAAAGAGTCCACATTACAT 23814 ||| || ||||| ||||| ||| | ||| Sbjct 282288 CAATATTCAAAAGGAGTCTACACTGCAT 282315 Score = 116 bits (128), Expect = 3e-21 Identities = 150/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| ||||| ||||| || || ||||| || || || |||||||| | | Sbjct 283252 ATGCAAATTTTTGTTAAGACCCTTACAGGTAAAACAATAACGCTGGAAGTTGAGGCATCC 283311 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| | |||| | ||| |||||| |||||||||||| | || ||||| ||| Sbjct 283312 GATACTATAGAAAATGTCAAAGCTAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCAA 283371 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTTAGGCGATTACA 23788 ||| | || || || || |||||||| || ||||| | || |||||| || |||| Sbjct 283372 CAGAGGTTGATCTTCGCAGGCAAACAGCTCGAAGATGGCCGTACACTTT--CTGACTACA 283429 Query 23789 ACATACAAAAAGAGTCCACATTACA 23813 | || ||||| ||||| ||||| || Sbjct 283430 ATATTCAAAAGGAGTCTACATTGCA 283454 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| |||||||||||||| |||||||| || || | |||||||| || | Sbjct 283708 ATGCAAATTTTTGTTAAAACCCTCACTGGAAAAACTATTACATTGGAAGTTGAGGCCTCC 283767 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | |||| |||||| |||||||| ||| | || ||||| || Sbjct 283768 GACACAATTGAGAATGTAAAGGCGAAAATTCAAGACAAAGAGGGTATTCCTCCAGACCAG 283827 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || || ||||| || || || ||||| | ||||| | || ||||| Sbjct 283828 CAGAGGTTGATCTTCGCCGGTAAGCAGCTTGAAGATGGCCGCACACTTTCTGACTACAAT 283887 Query 23791 ATACAAAAAGAGTCCAC 23807 || |||||||| ||||| Sbjct 283888 ATTCAAAAAGAATCCAC 283904 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| ||||| || ||||| || ||||| || || | |||||||| || | Sbjct 284392 ATGCAAATTTTTGTTAAGACTCTCACCGGTAAAACTATTACATTGGAAGTTGAGGCCTCC 284451 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| |||| | |||| ||||| ||||||||||| | || |||||||| Sbjct 284452 GATACTATTGAGAATGTAAAGGCGAAAATCCAAGACAAAGAAGGCATTCCCCCAGATCAG 284511 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | ||||| ||||| |||||||| || ||||| | |||||| | || ||||| Sbjct 284512 CAGAGATTAATCTTTGCGGGCAAACAGCTTGAAGATGGACGCACGCTTTCAGACTACAAT 284571 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| || ||||| Sbjct 284572 ATTCAAAAGGAATCCAC 284588 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| ||||| ||||| || || ||||| || || || |||||||| | | Sbjct 282568 ATGCAAATTTTTGTTAAGACCCTTACAGGTAAAACAATAACGCTGGAAGTTGAGGCATCC 282627 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| |||||| | ||| |||||| |||||||||||| | || || || || Sbjct 282628 GATACTATTGAAAATGTCAAAGCTAAAATTCAAGACAAAGAAGGTATTCCCCCGGACCAG 282687 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || || || || ||||| || ||||| | ||||| | || || || Sbjct 282688 CAGAGGTTGATCTTCGCTGGTAAACAGCTTGAAGATGGCCGCACACTTTCTGACTATAAT 282747 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| || ||||| | ||| | || | || | |||||||| Sbjct 282748 ATTCAAAAGGAATCCACTCTCCATCTTGTACTGAGACTTCGAGGAGG 282794 Score = 102 bits (112), Expect = 6e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||||||||| ||||| || || ||||| || || | ||||| || || | Sbjct 285532 ATGCAAATTTTCGTTAAGACCCTGACTGGTAAAACTATTACATTGGAAGTAGAGGCCTCT 285591 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| ||| | || | ||| ||| || ||||| || |||| ||||| || Sbjct 285592 GACACTATTGAGAATGTGAAGGC-AAAGATTCAGGATAAAGAGGGAATACCACCAGACCA 285650 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || || ||||| || ||||| | ||||| | || ||||| Sbjct 285651 GCAGAGGTTGATCTTCGCTGGTAAACAGCTTGAAGATGGCCGCACACTTTCTGACTACAA 285710 Query 23790 CATACAAAAAGAGTCCACATTACAT 23814 || ||||| ||||| ||| | ||| Sbjct 285711 TATTCAAAAGGAGTCTACACTGCAT 285735 Score = 98.7 bits (108), Expect = 7e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||||||||| || || || || ||||| || || || |||||||| | | Sbjct 284164 ATGCAAATTTTCGTTAAGACTCTTACAGGTAAAACAATAACGCTGGAAGTTGAGGCATCC 284223 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| |||||| | ||| |||||| |||||||||||| | || || || || Sbjct 284224 GATACTATTGAAAATGTCAAAGCTAAAATTCAAGACAAAGAAGGTATTCCCCCGGACCAG 284283 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || || || || ||||| || ||||| | ||||| | || || || Sbjct 284284 CAGAGGTTGATCTTCGCTGGTAAACAGCTTGAAGATGGCCGCACACTTTCTGACTATAAT 284343 Query 23791 ATACAAAAAGAGTCCACATTACAT 23814 || || || ||||| ||| | ||| Sbjct 284344 ATTCAGAAGGAGTCTACACTGCAT 284367 Score = 98.7 bits (108), Expect = 7e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||||||||| || || || || ||||| || || | ||||| || || | Sbjct 285076 ATGCAAATTTTCGTTAAGACTCTGACTGGTAAAACTATTACATTGGAAGTAGAGGCCTCT 285135 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | ||||||| || |||||||| | || || || || Sbjct 285136 GACACAATTGAGAATGTGAAGGC-AAAAATTCAGGATAAAGAAGGGATCCCCCCGGAACA 285194 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || |||||||| || || || ||||| | | ||| | ||||||||| Sbjct 285195 GCAGAGATTGATCTTTGCCGGGAAGCAGCTTGAAGATGGCCACACGCTCTCCGATTACAA 285254 Query 23790 CATACAAAAAGAGTCCAC 23807 || ||||| || ||||| Sbjct 285255 TATTCAAAAGGAATCCAC 285272 Score = 98.7 bits (108), Expect = 7e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||||||||| || || || || ||||| || || | ||||| || || | Sbjct 285988 ATGCAAATTTTCGTTAAGACTCTGACTGGTAAAACTATTACATTGGAAGTAGAGGCCTCT 286047 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| ||| | || | || || || ||||| | | || ||||| || Sbjct 286048 GACACTATTGAGAATGTGAAGGC-GAAGATCCAGGATAAAGAGAGAATCCCACCAGACCA 286106 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| || || || ||||| ||||| || ||||| | |||||| | ||||| || Sbjct 286107 GCAGCGGTTGATCTTCGCCGGTAAACAGCTTGAAGATGGCCGCACTCTTTCAGATTATAA 286166 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || ||||| ||||| ||||| ||| | || || Sbjct 286167 TATTCAAAAGGAGTCTACATTGCATCTTGTATT 286199 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| || ||||| || ||||||||||| || | ||||| || | || Sbjct 286444 ATGCAAATTTTCGTCAAGACCCTTACTGGAAAAACGATTACATTAGAAGTAGAGGCATCG 286503 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | |||| ||||| ||||| |||||| | || ||| || Sbjct 286504 GATACAATTGAGAACGTAAAGGCGAAAATCCAAGACAAGGAAGGTATTCCCCCAATCCAG 286563 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTTAGGCGATTACA 23788 || || ||||| || ||||| ||||| || ||||| | || |||||| || |||| Sbjct 286564 CAACGATTAATCTTCGCCGGTAAACAGCTTGAAGATGGCCGTACACTTT--CTGACTACA 286621 Query 23789 ACATACAAAAAGAGTCCAC 23807 | || ||||| || ||||| Sbjct 286622 ATATTCAAAAGGAATCCAC 286640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337957698520292