Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq4970 105 6e-18 >seq4970 Length=98340 Score = 105 bits (116), Expect = 6e-18 Identities = 163/228 (71%), Gaps = 5/228 (2%) Strand=Plus/Plus Query 4567 AACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCT 4626 ||||| | ||||| ||| |||||||| ||| || | || ||||| | |||||| | Sbjct 65741 AACCT-CATCTCTAGAAATGAGTTCGTTGCTAAATGTAAGGCCAGGCATGAGACCTCTTT 65799 Query 4627 TTTTAAGCCAAAATATAGCGGC-AAATGACC-CAGAAAAGAATATGCCTTCTACGGCGGC 4684 | || | |||||| |||||||| ||| ||| | ||||| |||||||||| || || || Sbjct 65800 TCTTCAACCAAAAGATAGCGGCGAAACTACCGCTGAAAA--ATATGCCTTCCACCGCAGC 65857 Query 4685 AAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGCCCA 4744 ||| || |||| ||| ||| | | | | || || ||||| || |||||||| Sbjct 65858 AAATGCGACTATTCGTTCGGGGAAAGTGGCAGACTCGTGGTTTATCCAATTCAATGCCCA 65917 Query 4745 GTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAA 4792 ||||||||| || ||||||||| | | | || ||||||||||| Sbjct 65918 GTTAGCTTTCTTAGCAACGCACGGCAGATTTTCGATTGCGTTAAATAA 65965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426984026400467