Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq4507 86.0 5e-12 >seq4507 Length=49670 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 27504 TGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 27563 |||||| | ||||||||||| || ||||| || ||||| | |||||| ||||| || | Sbjct 14100 TGCTCCATAGTGCCTCCATTGAAATCCGTAGACAGGTCCTAAGTCTCCTTCTTCTCTATC 14041 Query 27564 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 27623 | || || || | ||| || | || | ||| | ||||| || | | ||| Sbjct 14040 GTTAAATCCATGTGAATCTAGAAATTCCCGTGAGCTGTTTCCATCCCATATATGAATCCC 13981 Query 27624 CTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCAC 27683 ||| ||||| ||||| | ||| || || ||| | | ||||| ||||||||||| || Sbjct 13980 TTTCGACGAGAGTTCTTTCGCGTTCGTTGATCCTTTTATAAACCATAGCAGCTCCTCGAC 13921 Query 27684 GACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 27725 || | |||||||| || | || || || || | ||||| Sbjct 13920 TACTCCTTTCCAAAACACTCGTTTTGTGGTCAGTAATGGAAA 13879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369450462053969