Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq11430 152 7e-32 seq6000 149 9e-31 seq4970 100 4e-16 >seq11430 Length=555723 Score = 152 bits (168), Expect = 7e-32 Identities = 249/354 (70%), Gaps = 6/354 (2%) Strand=Plus/Plus Query 76119 TACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAA 76178 |||| |||||||| || || | |||||| ||| |||||||| || || |||||||| | Sbjct 42899 TACCGATAGGTCTGTGCCTTTGATTGGATCTTTTTGCTTCTGGGATTGGATAATAATTGA 42958 Query 76179 TATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAA 76238 | || || | ||||| || ||||| |||||||||| ||| ||||| || || | Sbjct 42959 TGTCGATTACGTTATTCAGGTTTCTAGTAACTACTTTAGTCACTTCCTTCAGCTTTTCGA 43018 Query 76239 AATCAAA--TTTTCCATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAAC 76296 |||| || ||||| | || || |||||||| | || || || || | ||||| || Sbjct 43019 AATCGAAAGTTTTCGAGCTT--ACGAACATATTGACGGCAATCGAAGCCAAGTTACATAC 43076 Query 76297 GGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGAT 76356 || || |||| | | | | |||||||| || || ||||| | |||||||| || || Sbjct 43077 AGCAACTTCATCCGGACTAGAATATTGTACGATTTCGGTGCACAAGTTACTACATTTTAT 43136 Query 76357 AGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACA-TGAGTCCTTATAAAGAACAAACG 76415 ||||| | |||||| || || || ||||| ||| || ||||| | | | | Sbjct 43137 TGTTCCTATATTTTGGTGATTTGATTTACGATTACAATGA-TCTTTATACAACATGTAAG 43195 Query 76416 GAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTT 76469 ||||||||||||| | |||||| ||| ||||| |||| | |||| |||| Sbjct 43196 GAGTTCCAGTTTCTACTTGTGATACGAGAATAGCAGTCCATAATTCTCTGGCTT 43249 Score = 145 bits (160), Expect = 1e-29 Identities = 205/288 (71%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 75646 TATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAG 75705 ||||| | ||| || || || || | ||| | | ||| || |||||| ||| || | Sbjct 42065 TATAACTTCATTTTTCATATCTTCGTCCCAGAGATCTCTTTCAGTTAAATCTCGTAGCAA 42124 Query 75706 ATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGT 75765 ||||||||| || | ||| |||||||| || | ||||| | || || ||||| || Sbjct 42125 ATGAGGATTCACGACTTGGAATTCTCCGGAGAGTACTCGCCTTACATATATGTTACTAGT 42184 Query 75766 ATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGG 75825 || || || | || ||||||||||| |||||||| ||||| ||||| ||||||||||| Sbjct 42185 GTAAGGCTCGATCGACTCATTGTTTCCTAAAATTTGCGCAGTCGAAGCTGTCGGCATAGG 42244 Query 75826 TGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCA 75885 || | ||||| | |||||| | |||||| | | ||||| ||||| || |||| Sbjct 42245 CGCGATCAATAGAGAATTTCTAACTCCATGTTTCTTTATTTTTTCTTTCAGCGCACTCCA 42304 Query 75886 ATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAAT 75933 |||||| | || | || ||| | ||| | ||| |||||||| || Sbjct 42305 ATCCCACAAGTCAGTCGGAGTAACGTTCCACATATCATATTGTAGGAT 42352 Score = 98.7 bits (108), Expect = 1e-15 Identities = 214/320 (67%), Gaps = 9/320 (3%) Strand=Plus/Plus Query 76664 TTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723 || ||||| |||||||| |||| | || || | |||||| | |||||||||||||| Sbjct 43778 TTACCTGTGTTCTTTTTCAGATTCAAAAAGTCAAAAATATCTGCATGCCATGGTTCTAAG 43837 Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783 || || || | | || |||| ||||| || || ||||| | ||||| || || ||| Sbjct 43838 TAGATAGCGAATGCTCCAGGTCTCTTATTCCCACCTTGATCAACATATCGTGCTGTATTA 43897 Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTT----AGATG-----TACCATTTGTTCCA 76834 || || ||||| | ||||||| | || || ||||| || || ||| Sbjct 43898 TTGTATACTCTGAGAATTGGAACTAGTCCATTGGACAGATGGCGACTAGGTACTGCGCCA 43957 Query 76835 GAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATT 76894 | ||| | |||| ||| |||||| | || | || || || || || || | Sbjct 43958 GCAATCTGTGTTCCTTTTGCCCGAATACAATGAACATTGAGACCAATACCACCAGCTGAT 44017 Query 76895 TTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATC 76954 ||| || || ||||| | ||||||||| ||||| || || ||| ||||| || || Sbjct 44018 TTACTAATAAGCGCACATCTTTTCAATGTATCATAAATTCCTACTACGCTATCTTCAGTC 44077 Query 76955 ATGTTAAGAAGAAAACAGCT 76974 || | ||||| ||||| || Sbjct 44078 ATTGTCAGAAGGAAACAACT 44097 Score = 87.8 bits (96), Expect = 3e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 76506 GTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCG 76565 ||||||| | ||||||||| || ||||| |||||| ||||||||||| | |||| | Sbjct 43541 GTGTATAGAGAGCTTCAAATTCGTCACCCCACACATCAGCCAAACCAGGAGAATCATGGG 43600 Query 76566 GACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCC 76625 | ||||| || ||| | |||| || |||| |||||| || |||||||| |||| Sbjct 43601 GGCACATTAAACTCCAAACTCCATTATCAAACACCCTTTTCATGAACAGATCAGGAATCC 43660 Query 76626 ATAGAGCA 76633 ||| |||| Sbjct 43661 ATAAAGCA 43668 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 75992 TCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCT 76051 || ||||| || ||||| ||||||||||| | |||||| || |||| |||| || | Sbjct 42698 TCACAACTTGCTTCTAAGGCACCGTAATATAGTGTTTCAAATATCTGAATATTCAGTTTC 42757 Query 76052 TGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGA 76111 |||||||| || ||||| |||||| | | | || || ||||| || ||||| || Sbjct 42758 TGCGCTTCTTCGCTTTCAAACGGATAACGCATCAAAAGGAACGCATCAGCAAGTCCTTGC 42817 Query 76112 ACTCCAATACC 76122 || |||||||| Sbjct 42818 ACGCCAATACC 42828 >seq6000 Length=2059021 Score = 149 bits (164), Expect = 9e-31 Identities = 248/354 (70%), Gaps = 6/354 (2%) Strand=Plus/Minus Query 76119 TACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAA 76178 |||| |||||||| || || | |||||| | | |||||||| || || |||||||| | Sbjct 208024 TACCGATAGGTCTGTGCCTTTGATTGGATTTCTTTGCTTCTGGGATTGGATAATAATTGA 207965 Query 76179 TATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAA 76238 | ||||| | |||| || ||||| |||||||||| ||| | |||||| || | Sbjct 207964 TGTCTATTACGTTATCCAGGTTTCTAGTAACTACTTTAGTCACTTTCTTTAGCTTTTCGA 207905 Query 76239 AATCAAA--TTTTCCATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAAC 76296 |||| || ||||| | || ||||||||||| | || || || || | |||||| | Sbjct 207904 AATCGAAAGTTTTCGAGCTT--ACAAACATATTGACGGCAATCGAAGCCAAATTACATGC 207847 Query 76297 GGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGAT 76356 || || |||| | | | | |||||||| || || ||||| | |||||||| || || Sbjct 207846 AGCAACTTCATCCGGACTAGAATATTGTACAATTTCTGTGCAGAAGTTACTACATTTTAT 207787 Query 76357 AGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTAC-ATGAGTCCTTATAAAGAACAAACG 76415 ||||| | |||||| || || || |||| |||| || ||||| | | | | Sbjct 207786 TGTTCCTATATTTTGGTGATTTGATTTACGATTACAATGA-TCTTTATACAACATGTAAG 207728 Query 76416 GAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTT 76469 ||||||||||||| | |||| | ||| ||||| |||| | |||| |||| Sbjct 207727 GAGTTCCAGTTTCTACTTGTGCTACGAGAATAGCAGTCCATAATTCTCTCGCTT 207674 Score = 141 bits (156), Expect = 1e-28 Identities = 179/246 (73%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 75646 TATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAG 75705 ||||| | ||| || || || |||| ||| | | ||| || |||||| ||| || | Sbjct 208874 TATAACTTCATTTTTCATATCTTCATCCCAGAGATCTCTTTCAGTTAAATCTCGTAGCAA 208815 Query 75706 ATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGT 75765 ||||||||| || | || || |||||| || ||||| | || | ||||| || Sbjct 208814 ATGAGGATTCACGACTTCAATTTCTCCGGAGGGTACTCGCCTTACATATGTGTTACTAGT 208755 Query 75766 ATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGG 75825 || ||||| || || ||||||||||| |||||||| ||||| ||||||||||||||||| Sbjct 208754 GTAAGGTTCGACCGACTCATTGTTTCCTAAAATTTGCGCAGTCGAAGCAGTCGGCATAGG 208695 Query 75826 TGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCA 75885 || | ||||| | |||||| | |||||| | | ||||| ||||| || |||| Sbjct 208694 CGCGATCAATAGAGAATTTCTAACTCCATGTTTCTTTATTTTTTCTTTCAGCGCACTCCA 208635 Query 75886 ATCCCA 75891 |||||| Sbjct 208634 ATCCCA 208629 Score = 98.7 bits (108), Expect = 1e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 76506 GTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCG 76565 ||||||| | |||||||||||| ||||| |||||| ||||||||||| | |||| | Sbjct 207387 GTGTATAGAGAGCTTCAAATTCATCGCCCCACACATCAGCCAAACCAGGAGAATCATGGG 207328 Query 76566 GACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCC 76625 | ||||| || ||| | ||||| || |||| |||||| || |||||||| |||| Sbjct 207327 GGCACATTAAACTCCAAACTCCATCATCAAATACCCTTTTCATGAACAGATCAGGAATCC 207268 Query 76626 ATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 ||| |||| || | ||||| | ||| ||| || || ||| Sbjct 207267 ATAAAGCATAGAACAATTCTCGTGCTCTGGTTTCCTCTTTACCT 207224 Score = 91.5 bits (100), Expect = 2e-13 Identities = 203/305 (67%), Gaps = 0/305 (0%) Strand=Plus/Minus Query 76664 TTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723 || ||||| |||||||| |||| | || || | |||||| | |||||||||||||| Sbjct 207150 TTACCTGTGTTCTTTTTCAGATTCAAAAAATCAAAAATATCTGCATGCCATGGTTCTAAG 207091 Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783 || || || | | || |||| |||| || ||||| || || || || | ||| Sbjct 207090 TAGATGGCGAATGCTCCAGGTCTATTATCCCCACCCTGTTCAATGCATAGTGCTGAATTA 207031 Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAA 76843 || || ||||| | |||||| | | ||||| || ||| ||| |||| ||| Sbjct 207030 TTGTATACTCTAAGCATTGGGACTAGTCCGTTGGACACACCTAGTGTGCCAGCAATCAGT 206971 Query 76844 CTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903 |||| | ||| ||||| | || | || || || | || || |||| | Sbjct 206970 GTTCCTCTTGCCCGAATGCAATGAACATTGAGACCAATATCACCAGCTGATTTACTAACA 206911 Query 76904 AGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGA 76963 || |||| | ||||||||| ||||| || || |||| |||||||| |||| | ||| Sbjct 206910 AGCACACATCTTTTCAATGTATCATAAATTCCTACTATGCTATCATCAGTCATTGTCAGA 206851 Query 76964 AGAAA 76968 || || Sbjct 206850 AGGAA 206846 Score = 86.0 bits (94), Expect = 9e-12 Identities = 120/167 (72%), Gaps = 6/167 (4%) Strand=Plus/Minus Query 75959 TATGTTTCGTAAGTCCCGTCCTTTTCA---GCTAGTTCGCAACTCGCCTCTAACGCACCG 76015 ||||||||||| || ||||||| || | || ||||| || ||||| |||||| Sbjct 208258 TATGTTTCGTATA---CGCCCTTTTCCATGGCGATCTCACAACTTGCTTCTAAGGCACCG 208202 Query 76016 TAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGA 76075 ||||| | |||||| || |||| |||| || | |||||||| || ||||| ||| Sbjct 208201 TAATACAGTGTTTCAAATATCTGAATATTCAGTTTCTGCGCTTCTTCGCTTTCAAACGGA 208142 Query 76076 TAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACC 76122 ||| | | | || || ||||| || ||||| || || |||||||| Sbjct 208141 TAACGCATCAAAAGGAACGCATCAGCAAGTCCTTGCACGCCAATACC 208095 >seq4970 Length=98340 Score = 100 bits (110), Expect = 4e-16 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 46891 TCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCC 46950 || || | ||||||||| || || | | |||||||||||| || | ||||| ||||| Sbjct 66048 TCCTTGATATATGTATCGATCAACAAAGAATACATTTCTGAGTGGACATTTTCCATAGCA 66107 Query 46951 ATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCA 47010 | ||| || || ||||| || | ||| || |||| || |||||| || || | ||| Sbjct 66108 ACCTGGAAACCATAAAAGCAGCGTGCCTCTGTAACTTGGACCTCTTGACTGAACCTTTC- 66166 Query 47011 GACAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATG 47063 |||| |||||| || || ||||||||| |||||| || ||||| || || || Sbjct 66167 TACAAGATTCTCGTTGACAATTCCATCAGAAGCAGCGAAGAATGCTAACACGTG 66220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712822121743680