Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq4970 91.5 2e-13 >seq4970 Length=98340 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838 ||||||||||| || | ||| ||||||||| || || | |||||| ||||||| ||| Sbjct 66054 ATATATGTATCGATCAACAAAGAATACATTTCTGAGTGGACATTTTCCATAGCAACCTGG 66113 Query 23839 AACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAA 23898 || |||||||| || | || || | | ||| || || | | || |||| | | | Sbjct 66114 AAACCATAAAAGCAGCGTGCCTCTGTAACTTGGACCTCTTGACTGAACCTTTCTACAAGA 66173 Query 23899 TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGC 23936 || ||||| ||||| |||||| |||||| ||||| || Sbjct 66174 TTCTCGTTGACAATTCCATCAGAAGCAGCGAAGAATGC 66211 Score = 87.8 bits (96), Expect = 2e-12 Identities = 70/82 (85%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 23217 TTTTTGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCTCTAATGATATAT 23275 ||| |||||||| ||||| | |||| ||||||||||| || |||||||| || || |||| Sbjct 65209 TTTCTGATATTCTCCAAC-CTTCTTCTCGAAAAAATTCGTTTTACCCTCCAAGGAAATAT 65267 Query 23276 TTTCCATAAAATCAAATGGATT 23297 ||||||||| ||||||||||| Sbjct 65268 GTTCCATAAAGTCAAATGGATT 65289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521405872158600