Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_000935.1 Length=36524 Score E Sequences producing significant alignments: (Bits) Value seq680 102 2e-17 >seq680 Length=42727 Score = 102 bits (112), Expect = 2e-17 Identities = 187/273 (68%), Gaps = 6/273 (2%) Strand=Plus/Plus Query 30439 ACGCCTCCACCATAGCCTAAGCCGAGCTCCATCACCTTACCGATTTGCCGTT---GTTCT 30495 ||||| |||||||| |||||||| | ||||| ||||| ||||| || ||| | || Sbjct 19204 ACGCCGCCACCATACCCTAAGCCCAATTCCATGACCTTGCCGATCTGACGTCCGAGGTCA 19263 Query 30496 TTGGTGACGTCCTCAGGTAAAAGATTAAAAGCGCGCGCATAGGCGAGTTTATAGAGGTCA 30555 | ||| | || | | | || || || || |||||||| ||||| || ||||| Sbjct 19264 TCA---ACGGCATCGGCGGAGATGTTGAACGCACGAGCATAGGCCAGTTTGTAAAGGTCT 19320 Query 30556 TCACCTTTGCCGTTATCAAACTCGCTAAAAGCGTTGACTTTCCAGTTTTCCCCTGCCAGC 30615 ||||||| ||| | || | | || || | | ||||| ||||| || |||| Sbjct 19321 TCACCTTCGCCCCTGTCGTATGCTGCGAACGCTTCCAGCTTCCATTTTTCACCAGCCAAG 19380 Query 30616 CACGCCAGCATGCGGCCTTCGATATTCGACAAATCCGAGATAACCAGCTTTTTACCCGGT 30675 |||||||| ||| || ||||| |||||||| || | | || || ||||||||||| Sbjct 19381 AACGCCAGCCCGCGCCCCTCGATGTTCGACAAGTCGGCAACGACGAGTTTTTTACCCGGC 19440 Query 30676 GGTGCAATAATACATCCTCTTAGCGCGGAACTG 30708 | | || || || || | ||||||||| || Sbjct 19441 GTCGGGATGATGCAGCCGCGCAGCGCGGAAGTG 19473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116704172431728