Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq942 93.3 3e-14 >seq942 Length=37279 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 ||| |||||||| ||||| |||| || | ||||| || ||||||||||||||||| Sbjct 15869 AGTAACATGAGCGATCATATAAGTCAATAAGGAATATGACGCTATGTTAAATGGCACTCC 15810 Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871 ||| |||||||| || ||||||||| || || || | | || | | ||||| Sbjct 15809 TAAACCCATATCTGCGCTTCTTTGATAAAGCTGCGCAGACAATTCACCGTTATTTACATA 15750 Query 101872 AAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCA 101931 |||||| | || ||||| || || || ||||||| ||||| || |||||| Sbjct 15749 AAATTGTACCATAACGTGACACGGTGGTAATGCCATTTTTGGAATATCGACTGGATTCCA 15690 Query 101932 AGCACACATTAACATCCTTCTATC 101955 ||| |||||| || | ||||| Sbjct 15689 AGCGGACATTATAATACGCCTATC 15666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361089161225804