Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_001354.1 Length=7614 Score E Sequences producing significant alignments: (Bits) Value seq8046 82.4 4e-12 >seq8046 Length=7925 Score = 82.4 bits (90), Expect = 4e-12 Identities = 100/133 (75%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 6458 ACACCCAGCGGCTCCCTGGTAGCTACTGAGCAGCAGCTGTTTAACAGGCCCTTTTGGCTG 6517 || ||||| ||||| ||||| | |||| |||||| | ||||||| ||| | |||||| Sbjct 706 ACTCCCAGTGGCTCTATGGTATCCTCTGAACAGCAGTTATTTAACAAGCCTTACTGGCTG 765 Query 6518 CAGAGATCCCAGGGCCATAACAATGGCA--TACTGTGGCACAACGAGGCCTTTGTAACAT 6575 | || ||||||| ||||||||||||| | ||| |||| | || || ||| | ||| Sbjct 766 CGAAGGGCCCAGGGACATAACAATGGCATGTGCTGGGGCA-ATCG-GGTCTTCCTGACAG 823 Query 6576 TGGTTGACACTAC 6588 |||| ||||| || Sbjct 824 TGGTGGACACCAC 836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 24239559574368