Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_001356.1 Length=7815 Score E Sequences producing significant alignments: (Bits) Value seq8046 111 8e-21 >seq8046 Length=7925 Score = 111 bits (122), Expect = 8e-21 Identities = 161/225 (72%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 6007 ATAGAAGATGGTGACATGATGGATATTGGTTTTGGGGCTATGGATTTTGCTGCTTTACAG 6066 || || ||||| || ||| | || | || || ||||| |||||||||| ||| ||||| Sbjct 412 ATTGAGGATGGGGATATGGTTGAAACCGGGTTCGGGGCCCTGGATTTTGCCGCTCTACAG 471 Query 6067 CAAGACAAGTCTGATGTCCCTTTAGAT-GTTGTTCAAGCAACATGCAAATATCCTGATTA 6125 |||| ||||||||||| | ||| |||| | | | | ||| |||||||| || || Sbjct 472 TCCAACAAATCTGATGTCCCCCTGGATATTTGTACTAAC-ATATGTAAATATCCGGACTA 530 Query 6126 TATCAGAATGAACCATGAAGCCTATGGCAACTCTATGtttttttttGCACGTCGCGAGCA 6185 | | | |||| ||| |||||||| | |||||||| |||| || | ||||| Sbjct 531 TCTGAAAATGGCTGCTGACCCCTATGGCGATTCTATGTTCTTTTCCCTGCGCAGGGAGCA 590 Query 6186 AATGTATACCAGGCACTTTTTTACTCGCGGGGGTTCGGTGGGTGA 6230 |||| ||| |||| ||||||| ||| || || ||| ||||||| Sbjct 591 GATGTTCACCCGGCATTTTTTTAATCGGGGTGGGTCGATGGGTGA 635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 24882493260624